Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2077 ATGGCGACGCCTTTGGCTGGATTGCAGCACTTGGACGGAGGAGGAGGAGTGGCCGTACTTTCTAATTCTTCTTCTGTGAACAAGGCTGATTCTTCCACATCCAATGGTGGTGCCTTGATTTCTTCTTCTTCTTCCTCATCCTCCTCCTCAAAATTGGACTCGCCTATTCGGATTTTCTTGTTCTTCCATAAAGCTATTCGGAATGAGCTTGATGCCCTACATCGACTTTCAATGGCATTTGCTACTGGAAATCGCTCTGATATTCAGCCCTTGTTCGAGCGTTATCATTTTCTCAGATCAATTTATAGGCACCATTCCAATGCCGAAGATGAGGTGATTTTCCCAGCTCTTGATATACGTGTGAAAAATGTAGCACAGACATATTCGCTCGAACACAAGGGTGAAAGTAACCTTTTTGATCATCTATTTGAGCTGTTAAATTCTACCACCCATAATAATGAAAGTTTCCTGAGGGAGTTGGCATTCTGCACTGAAGCCCTGCAGACATCAGTTAGTCAACACATGGCCAAGGAAGAGGAGCAGGTGTTTCCTCTGCTCATTGAAAAGTTCTCTCTTGAGGAACAGGCGTCTTTAGTTTGGCAGTTTCTATGCAGTATTCCTGTGAATATGATGGCAGTATTTCTTCCATGGCTTTCAGCATCTATATCACCTGATGAATCTCTGGATCTGCGGAAGTGCTTAGGCAAAATAGTGCCACAGGAAAAGCTTCTTCAAAAGGTTATTTTCACTTGGATGGATGGGGGAAGCAGTGCTCTTGCAGTAAAAAATTGTGTTGATCATTCTCAGTTTCGAGGCCCTAGTTGTCCATTAACCCACCATATTGAGAAAGTAAACTGTGCGTGTGAGTTCACAACAACTGGGAAAAGGAAACATTCTGAATCTGGTCTAGATGTTTCTGATATCAATGGAACACATCCTATAGATGAAATATTGCTGTGGCATAATGCAATAAAAAAAGAGTTAAGTGAGATAGTGGTGGAGACCAGGAAGATACAGCGCTGTGGAGATTTTACTAATCTATCAGCTTTTAATGAAAGATTGCAATTTATCTCTGAAGTTTGCATATTTCACAGTATTGCTGAGGACAGGGTTATATTTCCAGCTGTAGATGGTGAATTTTCATTCTTCCAGGAGCATGCTGAAGAAGAAAGCCAATTTAATGACTTTCGAAGTTTAATTGAAACTATTCAAAATGAAGAAGCAACATCTAATTCAGAAGTTGAATTTTATTCTAAGTTATGCTCACATGCTGATCAGATAATGGAAACTATACAAAGACATTTCCATAATGAAGAAGTTCAAGTTCTTCCCCTTGCTCGAAAGCACTTTACCTTTGGAAGGCAACGCGAACTTTTATATCAAAGTTTGTGCATGATGCCTTTGAAATTGATCGAACGTGTCCTGCCATGGCTGGTTGGATCATTGACCGAAGATCAAGTGAAGATGTTTTTAAGAAATATGCAATTGGCAGCTCCAGCAACAGATTTTGCTTTAGTCACGCTTTTTTGCGGTTGGGCTTGCAAGGCTCGTAATGAGGGCTTGTGTTTGTCTTCAAGTGCTTTGGGTTGCTGTCCTGCTCAAAAATTTACTGATATTGAAGAAAATTTTGTCCAGTCATCTTGTCCTTGTGGCACTTCTGCATCATCAGTTAGAGATTACTCATTGCCAGTTGAGCTAGATGAGAACAAAAGACCAGTGAAGCGGAGCATATTAGAGTTATGCAAGAATAGAGATGTCTCTGAAAGTTCAGAGTCTGAATGTATTGAGAAACAATGTTGTAGTGCAAGGTCTTGTTGTGTGCCAGGTTTAGGAGTTAGCAGTAATAATTTGGGGCAAAGCTCTCTTTCAACTGTCAAGTCCTTACGCGCCTTGTCTTTCAGCTCTTCTGCTCCATCTATAAATTCCAGTCTTTTCATATGGGAAACAGATAATAACTCATGTGATAACTCTGCAGAAAGACCCATTGATACTATATTTAAATTTCACAAAGCTATACGCAAAGATTTGGAGTATTTAGATATTGAATCTGGAAAGCTTAGTCATGGTGATGAGGCAATTATTCGGCAGTTTAATGGAAGATTTCGCCTTTTGTGGGGTCTATACAGAGCTCACAGTAATGCTGAAGATGATATAGTATTTCCAGCACTGGAGTCCAAAGAATCCCTTCATAATGTGAGTCATTCATACATGCTGGACCATAAGCAGGAAGAAAAATTATTTGAAGATATTTCCCATGTTCTTTCTGAGCTTTCTGTCCTTCATGAAGACTTTCAGATGACCCGTATGCCTAATGAAAGTAATTTTGGAACTTCTGATGTTAGCTTTGGAGATAATAACAGAAAGTACAATGAGCTAGCAACTAAACTTCAAGGGATGTGCAAATCCATAAGAGTGACGCTGGATCAGCATATTTTTAGGGAAGAGCTTGAGCTCTGGCCATTGTTTGGAAAACATTTTACTGTGGATGAACAAGACAAGATAGTGGGCCGTATAATTGGGACTACAGGTGCAGAAGTTCTACAATCAATGCTACCGTGGGTAACTTCTGCACTTAGTGAGGATGAACAGAACAAAATGATGGATACATGGAAGCAGGCAACAAAAAACACTATGTTTAATGAATGGCTTAATGACTGCTGGAAAGAAAGTCCATCAGCTATATTGCAGAAAGAAACACCTGAGCAAACTTCTCAAAATGGTACTGAACATCAGGAAAGCATGGACCTGAATGATCAGATGTTTAAGCCAGGTTGGAAAGACATATTCCGGATGAATCAGAATGAGCTTGAGTCAGAAATCCGGAAGGTCCATCAAGATTCAACTCTTGATCCAAGAAGAAAAGCATATCTTATGCAGAATCTAATGACTAGTCGATGGATTGCTGCACAGCAGAAATTACCTAAAGCAACAACTGGGGACTCTACAGATGGAGAAAGAATTGAAGGATGCTCAGCATCATTTCGGGACCAGGAGAAACAAATATTCGGGTGTGAACACTATAAAAGAAACTGTAAGCTTAGAGCTGCATGCTGTGGCAAGTTGTTTACATGTAGATTTTGCCATGACAATGTGAGCGATCACTCAATGGATAGAAAAGCAACTTCAGAAATGATGTGTATGCAATGCTTAAATATACAGCCAGTTGGGCCGAGATGCATGACACCTTCATGTAATGGATTTTTGATGGCAAAATACTATTGCAATATATGCAAATTTTTTGACGATGAAAGGAATGTATATCATTGCCCATTTTGCAATTTGTGCCGTGTGGGGAGAGGGCTTGGGATTGATTATTTTCATTGTATGAAATGCAACTGCTGCCTGGGGATAAAATCGACATCTCACAAGTGCCTGGAGAAAGGCTTAGAAATGAATTGCCCAATTTGTTGTGACTTCTTATTCACATCAAGTGCTACTGTCAGAGCTCTACCTTGTGGTCACTATATGCATTCAGCTTGCTTTCAGGCTTACACTTGTAGTCACTACACATGTCCAATCTGCAGCAAATCATTGGGCGATATGGCGGTTTACTTTGGCATGCTTGATGCTTTATTGGCAGCTGAGGAGCTCCCTGAAGAGTACAGGGACCGGCATCAGGACATACTTTGTAATGACTGTGAACGAAAGGGGTGTTCTCCCTTCCACTGGTTGTATCACAAATGTGAATTTTGTGGATCATACAATACCCGTGTGATCAAGTCAGAGCCAACAAATCCTCGTTGCTCTTAG 3750 0.4045 MATPLAGLQHLDGGGGVAVLSNSSSVNKADSSTSNGGALISSSSSSSSSSKLDSPIRIFLFFHKAIRNELDALHRLSMAFATGNRSDIQPLFERYHFLRSIYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSTTHNNESFLRELAFCTEALQTSVSQHMAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMAVFLPWLSASISPDESLDLRKCLGKIVPQEKLLQKVIFTWMDGGSSALAVKNCVDHSQFRGPSCPLTHHIEKVNCACEFTTTGKRKHSESGLDVSDINGTHPIDEILLWHNAIKKELSEIVVETRKIQRCGDFTNLSAFNERLQFISEVCIFHSIAEDRVIFPAVDGEFSFFQEHAEEESQFNDFRSLIETIQNEEATSNSEVEFYSKLCSHADQIMETIQRHFHNEEVQVLPLARKHFTFGRQRELLYQSLCMMPLKLIERVLPWLVGSLTEDQVKMFLRNMQLAAPATDFALVTLFCGWACKARNEGLCLSSSALGCCPAQKFTDIEENFVQSSCPCGTSASSVRDYSLPVELDENKRPVKRSILELCKNRDVSESSESECIEKQCCSARSCCVPGLGVSSNNLGQSSLSTVKSLRALSFSSSAPSINSSLFIWETDNNSCDNSAERPIDTIFKFHKAIRKDLEYLDIESGKLSHGDEAIIRQFNGRFRLLWGLYRAHSNAEDDIVFPALESKESLHNVSHSYMLDHKQEEKLFEDISHVLSELSVLHEDFQMTRMPNESNFGTSDVSFGDNNRKYNELATKLQGMCKSIRVTLDQHIFREELELWPLFGKHFTVDEQDKIVGRIIGTTGAEVLQSMLPWVTSALSEDEQNKMMDTWKQATKNTMFNEWLNDCWKESPSAILQKETPEQTSQNGTEHQESMDLNDQMFKPGWKDIFRMNQNELESEIRKVHQDSTLDPRRKAYLMQNLMTSRWIAAQQKLPKATTGDSTDGERIEGCSASFRDQEKQIFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMQCLNIQPVGPRCMTPSCNGFLMAKYYCNICKFFDDERNVYHCPFCNLCRVGRGLGIDYFHCMKCNCCLGIKSTSHKCLEKGLEMNCPICCDFLFTSSATVRALPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRHQDILCNDCERKGCSPFHWLYHKCEFCGSYNTRVIKSEPTNPRCS 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2077 1249 FunFam Zinc finger protein-related isoform 1 1128 1177 - -
Mibi02g2077 1249 Pfam Hemerythrin HHE cation binding domain 661 821 IPR012312 -
Mibi02g2077 1249 Pfam Hemerythrin HHE cation binding domain 312 446 IPR012312 -
Mibi02g2077 1249 Pfam Hemerythrin HHE cation binding domain 55 186 IPR012312 -
Mibi02g2077 1249 ProSiteProfiles Zinc finger RING-type profile. 1133 1175 IPR001841 -
Mibi02g2077 1249 SUPERFAMILY Zinc hairpin stack 1070 1126 IPR037275 -
Mibi02g2077 1249 MobiDBLite consensus disorder prediction 28 51 - -
Mibi02g2077 1249 Pfam Ring finger domain 1132 1174 IPR001841 -
Mibi02g2077 1249 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1129 1177 IPR013083 -
Mibi02g2077 1249 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 704 1242 - -
Mibi02g2077 1249 SUPERFAMILY CHY zinc finger-like 997 1060 IPR037274 GO:0008270
Mibi02g2077 1249 CDD Hr-like 58 184 - -
Mibi02g2077 1249 Gene3D nmb1532 protein domain like 654 906 - -
Mibi02g2077 1249 CDD RING-H2_Pirh2 1132 1175 - -
Mibi02g2077 1249 ProSiteProfiles Zinc finger CHY-type profile. 997 1066 IPR008913 GO:0008270
Mibi02g2077 1249 Gene3D - 1204 1245 - -
Mibi02g2077 1249 SUPERFAMILY RING/U-box 1130 1185 - -
Mibi02g2077 1249 CDD Hr-like 663 820 - -
Mibi02g2077 1249 FunFam Zinc finger protein BRUTUS 656 885 - -
Mibi02g2077 1249 Gene3D nmb1532 protein domain like 51 204 - -
Mibi02g2077 1249 Gene3D nmb1532 protein domain like 315 462 - -
Mibi02g2077 1249 Pfam CHY zinc finger 1004 1079 IPR008913 GO:0008270
Mibi02g2077 1249 SMART ring_2 1133 1174 IPR001841 -
Mibi02g2077 1249 Pfam Zinc-ribbon 1180 1237 IPR039512 -
Mibi02g2077 1249 CDD Hr-like 315 444 - -
Mibi02g2077 1249 ProSiteProfiles Zinc finger CTCHY-type profile. 1069 1132 IPR017921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2077 Mibi-ChrMibi02 22729647 22739644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2077 1 1249 C2H2 Transcription Factor Family AT3G18290 66.720 0.0 1689