Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2072 ATGTCTACTTCAAAGAGCGAGAGTAGTAGTAGTGAAGATGATAATGAGCTTAGGAGAGGACCTTGGACTCTTGAAGAGGATTCTGTGTTAACTCAGTATATATCTGCTCATGGTGAAGGAAGATGGAATTTGCTTGCAAAACGTTCAGGGTTGAAGAGAACAGGGAAGAGTTGCAGATTAAGATGGCTTAATTATCTGAACCCACAGGTAAAGAGAGGAAATTTATCCCCAGAAGAGCAGATTTTGATTCTCGAGCTCCACTTAAAGTGGGGAAACAGGTGGTCAAAGATTGCACAGAATCTTCCAGGAAGGACAGACAATGAAATCAAGAACTACTGGAGAACTAGGATTCAGAAACAAGCAAGACACATGAACATTGACACAAATAGCAGAGAGTTTAAGGAAATCATAAGGCGATTTTGGGTGCCAAGATTGTTGCAGAAAGCAAGAGAAATAACTCCTCCTCCTCCTCCTCCTGCCATGTCAATCCAAAACCAGACGATTCCTTTGCCTATGGACAGTATTTCTCAGTGTTCACAAATAGAGACAGTACCATTACCAACGCAGACTATTCCTTGGCAAGGAGGACCTTATTGTGCGATGAATGAAACAGTGCCAAACAGTTCATGCTTGTCCTCTTCTTCCTCGGAATCATCAAACATTCCAGAGGTGTCTCAGTTTCAGGCCTTGGATAACAATGACATGAGCTCCTTTATGTATGATGGGTACTATGTTAACAACAATACCTACGACATGGAAACATTCAATCTGGGGACAACATTGACTTCTGAGGCTATGGCAGGAAACTGGATGAACAATGATGTTGCATCATGCAGCATGTGGGGTATAGATGAACTGTGGCAGTTCAGAAACTTGCAACAATAG 885 0.4215 MSTSKSESSSSEDDNELRRGPWTLEEDSVLTQYISAHGEGRWNLLAKRSGLKRTGKSCRLRWLNYLNPQVKRGNLSPEEQILILELHLKWGNRWSKIAQNLPGRTDNEIKNYWRTRIQKQARHMNIDTNSREFKEIIRRFWVPRLLQKAREITPPPPPPAMSIQNQTIPLPMDSISQCSQIETVPLPTQTIPWQGGPYCAMNETVPNSSCLSSSSSESSNIPEVSQFQALDNNDMSSFMYDGYYVNNNTYDMETFNLGTTLTSEAMAGNWMNNDVASCSMWGIDELWQFRNLQQ 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2072 294 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Mibi02g2072 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 121 IPR017930 -
Mibi02g2072 294 Gene3D - 75 139 - -
Mibi02g2072 294 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Mibi02g2072 294 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 70 IPR017930 -
Mibi02g2072 294 Gene3D - 19 71 - -
Mibi02g2072 294 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 14 236 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mibi02g2072 294 FunFam Myb transcription factor 19 71 - -
Mibi02g2072 294 CDD SANT 21 66 IPR001005 -
Mibi02g2072 294 CDD SANT 76 115 IPR001005 -
Mibi02g2072 294 SMART sant 71 119 IPR001005 -
Mibi02g2072 294 SMART sant 18 68 IPR001005 -
Mibi02g2072 294 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Mibi02g2072 294 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Mibi02g2072 294 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2072 Mibi-ChrMibi02 22697348 22698452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2072 14 290 MYB Transcription Factor Family AT1G68320 45.775 8.21e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g2072 Myb_DNA-binding 3e-14 CL0123