Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2071 ATGGCTGAATTCACAACAGATTTTCAAAGCCTTAGACCCTCTTTTCCCTTCTTAGACATTGATCCAAACTTGGAACTTATAAACCAGTTCACAGGCATGATGAGCCCACTTGTCCTCATGGACAACTCTAATCTCAGTGTCCATAGCATAATTCCTTTCTCTCATCAAGAGCCTTCGGATTTTGCAGCAAACTTGGAGGGACCTCATTTCCCTGTTTTACCAGAAGAGAATGAAATCCAGGAGAGTCAAAAGAGGAAAGCCATGGATGTTACAGAGACCATAAGTTCTGTAAATCACACTACTGCAAATTCTGAAAGTGGAAAAACAAAGATCATTAGTAGTTCTGGAAGAGGTAAGAGAGCCAAAAGCAACATAACAGAAGAAGGAAAAACAAAGGAAGTGGTTCATGTCAGAGCCAGAAGAGGTCAAGCTACAGACAGTCACAGTTTAGCAGAAAGGGTCCGAAGGGGGAAAATCAATGAAAAAATAAGACGCTTGCAGACCATTGTCCCAGGATGTTACAAGACCATGGGTATGGCAGTGATGTTGGACGAGATTATAAACTATGTCCAGTCCTTGCAGCATCAGGTGGAGTTTCTATCTATGAAGTTGACTGCAGCAAGTTCCTTCTACGATTTCAATTCAGAGACAGATGCTATAGAAACAATGCAGAGAGCAAGGGCATTCAAGGCAAAAGGATTATCCTCAAGAAATGGGAGTGAAGAAGGAGGATATGGTGGAGGGGTTTCCTCTTGCTTTGATCATCCAACTTGGCCACTCTGA 783 0.424 MAEFTTDFQSLRPSFPFLDIDPNLELINQFTGMMSPLVLMDNSNLSVHSIIPFSHQEPSDFAANLEGPHFPVLPEENEIQESQKRKAMDVTETISSVNHTTANSESGKTKIISSSGRGKRAKSNITEEGKTKEVVHVRARRGQATDSHSLAERVRRGKINEKIRRLQTIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSMKLTAASSFYDFNSETDAIETMQRARAFKAKGLSSRNGSEEGGYGGGVSSCFDHPTWPL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2071 260 MobiDBLite consensus disorder prediction 98 125 - -
Mibi02g2071 260 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 83 217 IPR024097 GO:0006355
Mibi02g2071 260 MobiDBLite consensus disorder prediction 98 120 - -
Mibi02g2071 260 Pfam Helix-loop-helix DNA-binding domain 147 194 IPR011598 GO:0046983
Mibi02g2071 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 143 193 IPR011598 GO:0046983
Mibi02g2071 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 211 IPR036638 GO:0046983
Mibi02g2071 260 SMART finulus 149 199 IPR011598 GO:0046983
Mibi02g2071 260 Gene3D - 140 211 IPR036638 GO:0046983
Mibi02g2071 260 CDD bHLH_AtBPE_like 133 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2071 Mibi-ChrMibi02 22661060 22662287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2071 1 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 48.746 3.32e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi02g2071 HLH 4.2e-06 No_clan