Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2064 ATGGATGAAAATAATCTGCCTCCTGGATTCAGATTCCATCCCACGGATGAAGAGCTCATAAATTATTATCTTACTAATAAAGTTTCTGATTCTAATGGCTTCACTTGCAAAGCTATAGCCGTGGTTGATCTCAACAAGTCTGAACCTTGGGACCTTCCAGGTAAGGCTTCGATGGGAGAGAAGGTATGGTATTTCTTCAGTTTAAGAGATAGGAAGTATCCAACAGGACTTAGAACCAACAGAGCTACAGAATCAGGCTATTGGAAAACCACCGGCAAAGACAAACACATCTTTCACGGCGGCGCATTGGTAGGCTTTAAGAAAACCCTCGTCTTCTACCAAGGTAGAGCTCCAAGAGGCCTCAAATCCAACTGGGTCATGCATGAATATCGCCTCCACAATAGTATCCACCATTTTGCACCTTCCAAGGAAGAATGGGTTGTTTGCAGGGTGTTCCAGAAGAGCATATCAGCAGCCAAAAAGCCTCATCAGGAGATCACATCATCGTCCCAGCAGGATTCACCTTGCGATGCAACCTCCTCAATGGTTAACGAACTTGGTGACATGGAACTTGCTAATTTTAGATTCACAAACAACGTTAACAATAATATTAATGATGATGGGGATCAAAGTAATAATAATATAAACACAAACATGAACTTGAGCAACAATTATTATTGGTCATCATCATCATCATCATCAACAGCTGCATTATTAACAGACCAAGTTATTCCGTCTCTTGTTGCATGGCCTAATAGTAATAATCCCAATCAGCTGATGACGTCATCAGTGAACTCATTGCTTCTCAAAGCACTGCAGCTCAAGAGCTATCATCATCAGTTGCAGCAGCAACAAGCTAATAATGATCAGTTTGAAGCATCAACATCATCGTACATGCCTTCTCAAGCAGTTCCTAACGTTAATAATAATGGAGGGACTATTAATACTCATCATCATGTCCTCTCAAATCCCAGTGCTTCTCATCAACCCTTCAATCTTGACTCCCTTTGGTGA 1014 0.4132 MDENNLPPGFRFHPTDEELINYYLTNKVSDSNGFTCKAIAVVDLNKSEPWDLPGKASMGEKVWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKHIFHGGALVGFKKTLVFYQGRAPRGLKSNWVMHEYRLHNSIHHFAPSKEEWVVCRVFQKSISAAKKPHQEITSSSQQDSPCDATSSMVNELGDMELANFRFTNNVNNNINDDGDQSNNNINTNMNLSNNYYWSSSSSSSTAALLTDQVIPSLVAWPNSNNPNQLMTSSVNSLLLKALQLKSYHHQLQQQQANNDQFEASTSSYMPSQAVPNVNNNGGTINTHHHVLSNPSASHQPFNLDSLW 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2064 337 MobiDBLite consensus disorder prediction 299 326 - -
Mibi02g2064 337 FunFam NAC domain-containing protein 100-like 15 158 - -
Mibi02g2064 337 Gene3D NAC domain 15 157 IPR036093 GO:0003677|GO:0006355
Mibi02g2064 337 ProSiteProfiles NAC domain profile. 6 154 IPR003441 GO:0003677|GO:0006355
Mibi02g2064 337 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 275 - -
Mibi02g2064 337 Pfam No apical meristem (NAM) protein 7 132 IPR003441 GO:0003677|GO:0006355
Mibi02g2064 337 SUPERFAMILY NAC domain 2 154 IPR036093 GO:0003677|GO:0006355
Mibi02g2064 337 Coils Coil 274 294 - -
Mibi02g2064 337 MobiDBLite consensus disorder prediction 160 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2064 Mibi-ChrMibi02 22578897 22581857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2064 3 337 NAC Transcription Factor Family AT3G18400 49.580 3.67e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi02g2064 NAM 3.1e-39 No_clan