Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g2057 ATGAAAGGAGCAAGTGCATTAGGGGCAAAAACTGCGAGAGCTTGCGATAGCTGCCTTCGCCGGCGAGCACGGTGGTTTTGTGCTTCAGATGATGCTTTCTTATGCCATGGATGTGACAATATTGTTCACTCAGCAAATCAGTTAGCAAGCAGACATGAAAGAGTTCGTCTTCAAACCTCTTCATCATCATCATCATCATCATCATCCTCCAAGAAGGCTACCACCTCCTCTCAACAAGTTTGGTACAGTGGATTCACGCGCAAGGCAAGAACCCCACGTCACAATAGCAGCAACAAGCAGTTCTTATCATTGGCTCATCATCAGCAAAAATCCAAACTTAAGGAGGAGATTTTCAATAGTACTCTTCCCGTTGTGCCGGAGCTCGAAGAAGGCGGTGGAGGCGGGCTAGATGAGAGCGATGAGCTGTTGCTTTGCCGGGTTCCGGAGTTTGATCCTTCATTTGAAGATGAGCTAAGCAATATTTACAGTTGTGAAGTTGGGGATGAGAGGTTGGAGGAGGTTGTGAACAATAACAATAATGAAGGGGATATTGATGAAGGAACATGTGACTTGGACAATTTTTCGGAGTTTTTGGCTTCGGATATGGATCTTGCAGAGTTTGCTGCTGATGTTGAGAGCTTACTGGAAAGAGGGTTTGATGATGATGATGAATCTGCAGGAGCTGAACCGATGTTGGATTGTAAACAGGAAGAAATGATGGAGGCAATATTGGAGGGTAATCTGGGGACAGACAAAAATGGTGCTATGGTAAAGATTAAGGATGAACAAGTGGTTGAAGGCAACATGGTTGTAGGCATGACAAGAAGCGATACCTTAATTCATCAACATGTTGATGAAGAGGAAAAGAAGGGGAAGATTTTTTTGAGGCTAAACTATGATGATGTGATAAGTGCTTGGGCAAGTCAAGGTTGTCCCTGGACTAATGGAAACCCTCCTCAGTTCAACTCTTATGACTGCTGGCCACACTGCTTGGGTTCGAGTGGAGGAGATGTTCATCATCAGTGTTGTTATGGGGAAGTTATTGGGAGCTTAAGGGGACAAGTAGATGGGGGAAGAGAAGCGAGAGTGTCAAGGTATAGAGAGAAGAGAAGGACACGTTTGTTTGCAAAGAAGATAAGGTACGAAGTGAGGAAACTGAACGCAGAAAAAAGACCTCGTATGAAAGGTCGCTTTGTGAAGAGGGCCTCCTTCCTTGGAACCACTTCTACTGCTTTGCCTGCTGCTTCTCACTGA 1254 0.4506 MKGASALGAKTARACDSCLRRRARWFCASDDAFLCHGCDNIVHSANQLASRHERVRLQTSSSSSSSSSSSKKATTSSQQVWYSGFTRKARTPRHNSSNKQFLSLAHHQQKSKLKEEIFNSTLPVVPELEEGGGGGLDESDELLLCRVPEFDPSFEDELSNIYSCEVGDERLEEVVNNNNNEGDIDEGTCDLDNFSEFLASDMDLAEFAADVESLLERGFDDDDESAGAEPMLDCKQEEMMEAILEGNLGTDKNGAMVKIKDEQVVEGNMVVGMTRSDTLIHQHVDEEEKKGKIFLRLNYDDVISAWASQGCPWTNGNPPQFNSYDCWPHCLGSSGGDVHHQCCYGEVIGSLRGQVDGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRASFLGTTSTALPAASH 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g2057 417 SMART bboxneu5 10 57 IPR000315 GO:0008270
Mibi02g2057 417 ProSiteProfiles Zinc finger B-box type profile. 10 57 IPR000315 GO:0008270
Mibi02g2057 417 ProSiteProfiles CCT domain profile. 359 401 IPR010402 GO:0005515
Mibi02g2057 417 Pfam CCT motif 359 401 IPR010402 GO:0005515
Mibi02g2057 417 Pfam B-box zinc finger 12 55 IPR000315 GO:0008270
Mibi02g2057 417 MobiDBLite consensus disorder prediction 53 75 - -
Mibi02g2057 417 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 6 403 - -
Mibi02g2057 417 CDD Bbox1_BBX-like 14 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g2057 Mibi-ChrMibi02 22507874 22509642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g2057 4 401 C2C2-CO-like Transcription Factor Family AT1G25440 42.453 1.75e-88 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mibi02g2057 zf-B_box 9.7e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g2057 02 22507874 22509642 Mibi02g2057 02 22507874 22509642 ECH