Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1997 ATGGAGGAGAAGGGGGTGATCGCACCGTTCATTATGAAGACCTTCCACATAGTCAACGATCCCATGACCGATCATCTCGTCTCTTGGGGTCCTGCCAATAACAGCTTCATCGTCCTCGACCCTTTAGATTTCTCTCGCCTCATCTTGCCTGCATACTTCAAGCACAACAACTTTTCCAGCTTCGTCCGTCAGCTCAACACCTATGGCTTCAAAAAGGTGGATCCGGATCGATGGGAGTTTGCAAACCAGTGGTTCCTGCGTGGGCAGAAGCATCTGCTGGTGAACATAGTGAGGAAGAAACAGAGCAATCATAATAACAACAACAACAAGAACAAGAATGTCATGATGTCTTCTTATTATCATAACGAGGGGTTGTTAATGGAGGAAATGGATGAGGAGGTGTTGGTTATGGAGATTGCGAGGTTGAAGGAAGAACAGAAAGTGTTAGACAGGGAAGTGGAAGGGATGAACAAGAGGTTGGAGGAAACAGAGAGGAAGCCTCACAAAATGATGGCCTTCCTTTGTAAAGTGGTGGACGATCCTGACCTCTTATCACGCGTTTTGGCTGACCGAGAAGGACGACGCCGTGTGGCGGCAGACAAGAGGCGGCGCCTGATATCGCCGCCCGCCGCCGCCACAACCTCGTCGTCGTCTTCGTCTGGAATGGCCGTTAGAACGAAGGTGGAGGAAGATGAAACGACGGTGGGAGGGTTTATGTCGTCGTCGCCGGAGACTGGTTTGGAGGCTCATCATAATATTTGTCACTCTTATTCGCCGCCGCAGGAGTCGCCGTCTTGGTGGGGCCCAGGCCAGGCTGCGGTGGATACGCCTCCTCGGAGTCAACAGAGTATTAGTGACGCCGCCGTGGGTACGGTGTGGCCGCCGCCTCAAGCCGGTGATTTCACGGTTGTGGAGCCGGAGATGGAGACGAAGCCGCCGCCGCCTTATCCATTTTCGCTGTTGGAGTGGGGCTTTTAA 978 0.5276 MEEKGVIAPFIMKTFHIVNDPMTDHLVSWGPANNSFIVLDPLDFSRLILPAYFKHNNFSSFVRQLNTYGFKKVDPDRWEFANQWFLRGQKHLLVNIVRKKQSNHNNNNNKNKNVMMSSYYHNEGLLMEEMDEEVLVMEIARLKEEQKVLDREVEGMNKRLEETERKPHKMMAFLCKVVDDPDLLSRVLADREGRRRVAADKRRRLISPPAAATTSSSSSSGMAVRTKVEEDETTVGGFMSSSPETGLEAHHNICHSYSPPQESPSWWGPGQAAVDTPPRSQQSISDAAVGTVWPPPQAGDFTVVEPEMETKPPPPYPFSLLEWGF 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1997 325 MobiDBLite consensus disorder prediction 209 224 - -
Mibi02g1997 325 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1997 325 FunFam Heat stress transcription factor B-4 2 100 - -
Mibi02g1997 325 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1997 325 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1997 325 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1997 325 Gene3D - 2 101 IPR036388 -
Mibi02g1997 325 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1997 325 MobiDBLite consensus disorder prediction 195 316 - -
Mibi02g1997 325 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1997 325 Coils Coil 139 166 - -
Mibi02g1997 325 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 228 IPR027725 -
Mibi02g1997 325 SUPERFAMILY "Winged helix" DNA-binding domain 8 99 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1997 Mibi-ChrMibi02 21272600 21273707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1997 6 325 HSF AT3G24520 42.197 1.55e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi02g1997 HSF_DNA-bind 6e-30 CL0123