Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1991 ATGTCAACGTCGCCGCCTCCCGGAGCCTCTCCGTCACCCACATCGCCGCCCTCTACCAACACTACCTCTCCTCCACCACCGCCCACTCCCTCCACTACCAACACTACCTCTCCTCCACCATCTCCTACTCCCTCCCCTCCGCCGCCCTCCACCAACACAACCTCTCCTCCGCCGCCGGCCACCGCCACTCCCTCTCCGCCGCCTCCGCCTTCGTCTGCTACCAATTCTCCGCCCCCTCCGGCGACTCGGACCTCGCCTCCTCCTCCTCCGGCAAGTTCAACTCCGCCTCCACCGCCTTCTTCTTCTTCTTCTTCTTCTTCGTCTACTGGTGTTATTGTTGGGATCGCCGTTGGTGGTGTGGCCGTTCTTGTCATCCTTACCCTTTTCTGCTTTTGTTGTTGGAGGAAGAAGAAGAGAACCAGTAATGTGGGATACTATGAGCCCCCTGGCCCTCAGCCACCTAAAGGTGACCAATATCATCAGTGGCAACATAATGCTCCCCCTCCGTCAGATAATGTTGTCTCTGTGATGCAAAAGCCCCACTCACGACCATCCCAACCACCAGCTTATGCCTCTAAACCCCCTCCGGCCCCACTATTCCTGAGCAGCAGTGGTGGGTCAGGTTCCAACTATTCAGGAGGCGAAAATCCATACCGACCCCCTTCTCCTGGTATTTCATTGGGTTTCTCAAAGAGCACATTTGCATATGAAGAGTTGGTACGGGCAACAGATGGGTTCTCCGATGCCAACCTCCTTGGACAAGGTGGATTTGGATATGTCCACAAAGGGATCCTTCCGAATGGGAAGGAGGTGGCAATCAAGCAGCTAAAGGCAGGAAGTGGGCAGGGAGAACGAGAATTTCAAGCAGAAGTTGAGATCATTAGCCGAGTTCATCACAGGCACCTTGTTTCTCTGGTTGGATACTGCATCACTGGACACCAGAGATTGCTGGTTTATGAGTTTGTTCCGAACAATACGTTGGAATTTCACTTACATGGAAAAGGGCGGCCTACTATGGATTGGTCCACAAGACTGAAAATTGCATTGGGATCAGCAAAAGGACTGGCGTATCTCCATGAGGATTGTCATCCTAAGATCATCCATCGTGATATCAAAGCTTCTAATATACTTCTGGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGACTAGCAAAGATTTCTTCTGATCTCAATACTCATGTTTCCACTCGAGTGATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCTTCCAGTGGGAAACTTACAGACAAATCAGATGTTTTCTCCTTTGGGGTCATGCTTCTGGAGCTGATTTCTGGCCGTCGACCAGTTGACACAACTCATACTTTCATGGAGGATAGTCTGGTAGACTGGGCGAGGCCTTTGCTAATACGTGCTTTAGAAGAGCATGATTTTGATTCCGTGGTTGATCCAAGGCTCAAAGATGAATATGACCCCAATGAAATGACTCGCATGGTTGCATGCGCTGCAGCCTGCACCCGCCATTCAGCACGTCATAGGCCAAAAGTGAGCCAGGTTGTTCGTGCTCTGGAAGGAGACATGTCTCTATCAGATCTGAACGAAGGAATTAAACCTGGACATAGCTCTGCCTACAGTTTCCGAGGAAGCTCTGATTATGACACTGCACAATACAAGGAAGACATGAAAAAGTTCAGGAAAATGGCTTTGGGAACCCAGGAACTTGGCGTGAGCAGTGAATACAGTGCACCTGCAAGTGACAGCAGCTTATACCCATCTGGCTCAAGCAGCGAAGGCCAGAGCCGGCAGACCACCCAGGAAATGGAAATGAGGAAGATGAATAACCACCAAGGTTACAGTGGAAGCTCTTGA 1857 0.5062 MSTSPPPGASPSPTSPPSTNTTSPPPPPTPSTTNTTSPPPSPTPSPPPPSTNTTSPPPPATATPSPPPPPSSATNSPPPPATRTSPPPPPASSTPPPPPSSSSSSSSSTGVIVGIAVGGVAVLVILTLFCFCCWRKKKRTSNVGYYEPPGPQPPKGDQYHQWQHNAPPPSDNVVSVMQKPHSRPSQPPAYASKPPPAPLFLSSSGGSGSNYSGGENPYRPPSPGISLGFSKSTFAYEELVRATDGFSDANLLGQGGFGYVHKGILPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGHQRLLVYEFVPNNTLEFHLHGKGRPTMDWSTRLKIALGSAKGLAYLHEDCHPKIIHRDIKASNILLDFKFEAKVADFGLAKISSDLNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELISGRRPVDTTHTFMEDSLVDWARPLLIRALEEHDFDSVVDPRLKDEYDPNEMTRMVACAAACTRHSARHRPKVSQVVRALEGDMSLSDLNEGIKPGHSSAYSFRGSSDYDTAQYKEDMKKFRKMALGTQELGVSSEYSAPASDSSLYPSGSSSEGQSRQTTQEMEMRKMNNHQGYSGSS 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1991 618 Pfam Protein tyrosine and serine/threonine kinase 251 519 IPR001245 GO:0004672|GO:0006468
Mibi02g1991 618 SUPERFAMILY Protein kinase-like (PK-like) 220 519 IPR011009 -
Mibi02g1991 618 PRINTS Proline rich extensin signature 53 69 - -
Mibi02g1991 618 PRINTS Proline rich extensin signature 26 47 - -
Mibi02g1991 618 PRINTS Proline rich extensin signature 4 16 - -
Mibi02g1991 618 MobiDBLite consensus disorder prediction 572 618 - -
Mibi02g1991 618 MobiDBLite consensus disorder prediction 1 109 - -
Mibi02g1991 618 MobiDBLite consensus disorder prediction 145 223 - -
Mibi02g1991 618 Gene3D Phosphorylase Kinase; domain 1 225 321 - -
Mibi02g1991 618 MobiDBLite consensus disorder prediction 163 182 - -
Mibi02g1991 618 Gene3D Transferase(Phosphotransferase) domain 1 322 530 - -
Mibi02g1991 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 366 378 IPR008271 GO:0004672|GO:0006468
Mibi02g1991 618 ProSiteProfiles Protein kinase domain profile. 246 525 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1991 618 MobiDBLite consensus disorder prediction 1 102 - -
Mibi02g1991 618 ProSitePatterns Protein kinases ATP-binding region signature. 252 274 IPR017441 GO:0005524
Mibi02g1991 618 FunFam proline-rich receptor-like protein kinase PERK1 224 321 - -
Mibi02g1991 618 SMART serkin_6 246 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1991 618 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 119 584 - -
Mibi02g1991 618 FunFam Proline-rich receptor-like protein kinase PERK1 322 530 - -
Mibi02g1991 618 MobiDBLite consensus disorder prediction 202 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1991 Mibi-ChrMibi02 21174144 21177460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1991 68 599 Trihelix Transcription Factor Family AT1G70460 51.679 3.41e-172 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi02g1991 PK_Tyr_Ser-Thr 3.9e-46 CL0016