Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1979 ATGTTGTTTGGTCCGGGCGTTCGGGCGTTGTCGTATGATTATCCAGGGAAGAAGCCAGCGAGGCAGCTCGATTTTACGGGTCATGGTGGGTCAAAATTAACTGTGGCTTCTTCAAACGAAACTCCGCAATTGCAACAGAAATCTCAGCCACTTCCTGATTGGCTGACATACAAGACAACGGTTGTGCAGATGCCACCATCGGCTACTGTGGCTTCTTCAACTGAAAATCCGCAATTGCAACAGAAATCTCAGCCACTTCCTGATTGGTTGACATATAAGACAACGGTTGTGCAGATGCCGCCAGTATTAAAGAAGCCACCAATACTTGGATTGTTGACAAGGAAATCTAAACCTATCAACAACCGAGAAATAGAATATTGGAAATCATCTGAATACTGCGAATGTTTTGCATCAGGAATATATTGTGAGGGGTGCAACTGTGTAAATTGTTTTAACAATGTTGAGAATGATATGGCAAGACGGGAGGCTATTGAAGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCCAGCAGCCCTCTTGGGACTCGTAATAACAGGGAGGAGACTGGAGAAGTTTTACTACTGGGAAAGCACAACAAGGGCTGTCACTGCAAAAAATCAGGATGCCTCAAAAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGCTCGGAAAATTGCAAATGCTTGGACTGCAAAAATTTTGAGGGAAGTGTAGAAAGGCAAACGTCATTCCATGGAGATCATAATAGCAATATAGAATTTATTCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGTTATTCATGCCCTCCAGTATCCAAGAAAAGAGAAGGTCAGGAGCACTTTTTTGGGCCAACAGTTAAGGATCCATCTGTTGGCATGCTTGGGCAGTTTCAACAGGCAAACAATGTCGGAGTTCCATTACCATCCTCATCCTTGTCTTCTGTCCCTGTTCCTGGGGTTGGAAGTGCTGCAGTAGGTCCTTCAAAATTTGCATACAGGTCTCCTATAGCAGACATCATACAGCCACAGCACTTGAAGGAACTTTGCTCTGCTCTGGTGCTAGCATCAGGACAAGCTGCTAAGACAGTCTCAGATAAAATTGGTCCAGATGATTCCAGTTCAGATGGTGCTGATATCTCAAAGAGGAGGCCCATGTCTCCGGGAACTCTAGCCTTGATGTGCGACGAGCGAGATGCAATGTTCATGGCAGCTCACTCTCCTAGTGGTCGGATGGCACATGCTTCCAACACATCTTCACTGTCTGCTCGTGGTCAAGGCATGACGGAGGAACATGCAGAGCAAGAAAGGATTGTATTGACAAAAGTGGTTAATTTCTTCTTCCTAATTTCAGAAACAAAGTGTTCTTCATTAGCTAGAAAACAATTGGAGGCTCAAAAGGACCCAGTCAGCTGTTATGTTGGAAATACAAGCACAATGACAACACATCAGCAGGTTGCTACTAGTAATGGTGTTGCCAAAGCTTCAGTCCCACCCATGGCCACAAGTATGAACACAATAACTTCAACAGCTTTGATTCCTAGTAGTATTATTCCTGAAAATGGGGAAAGAAAGCCAAAGATCGAAAAGGAGAATATGAAGAGATTCTGA 1641 0.4412 MLFGPGVRALSYDYPGKKPARQLDFTGHGGSKLTVASSNETPQLQQKSQPLPDWLTYKTTVVQMPPSATVASSTENPQLQQKSQPLPDWLTYKTTVVQMPPVLKKPPILGLLTRKSKPINNREIEYWKSSEYCECFASGIYCEGCNCVNCFNNVENDMARREAIEATLERNPNAFRPKIASSPLGTRNNREETGEVLLLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFEGSVERQTSFHGDHNSNIEFIQQAANAAITGAIGSSGYSCPPVSKKREGQEHFFGPTVKDPSVGMLGQFQQANNVGVPLPSSSLSSVPVPGVGSAAVGPSKFAYRSPIADIIQPQHLKELCSALVLASGQAAKTVSDKIGPDDSSSDGADISKRRPMSPGTLALMCDERDAMFMAAHSPSGRMAHASNTSSLSARGQGMTEEHAEQERIVLTKVVNFFFLISETKCSSLARKQLEAQKDPVSCYVGNTSTMTTHQQVATSNGVAKASVPPMATSMNTITSTALIPSSIIPENGERKPKIEKENMKRF 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1979 546 SMART CXC_2 201 242 IPR033467 -
Mibi02g1979 546 SMART CXC_2 128 156 IPR033467 -
Mibi02g1979 546 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 204 238 IPR005172 -
Mibi02g1979 546 MobiDBLite consensus disorder prediction 374 398 - -
Mibi02g1979 546 PANTHER TESMIN/TSO1-RELATED 131 454 IPR028307 -
Mibi02g1979 546 ProSiteProfiles CRC domain profile. 120 241 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1979 Mibi-ChrMibi02 21039089 21047207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1979 3 509 CPP Transcription Factor Family AT4G29000 44.732 1.81e-141 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mibi02g1979 TCR 3e-12 No_clan