Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1970 ATGAATAGTAGAGGTCATCTTCTTCATCAGAGCTCACCAGTTCAGCAAATGATGGCCAACCCAAATTGGTGGAACATCAATAATATGAACACTATTCGCCATCAACAACAACCTTCTCCTTTCTTATCCTCTCCCTCCAATTTTCTTCCCAATCACCATCACCACCTTCCTTCTTGGCAACACGACCTCAACAGTAATCAACATCCCCTTCCTGACTCTTGGACCCAACTTCTCATGGGTGGATCGGTGGGTGAAGAAGATAGGGGAGGTATGGGTCAGTTTCAGGAGGTGAATATGAATGCTAGTTTGGTGGATATAAAGCAAGAGAGTTCAGTGAACAGCTATGGTTATGGACATGGAAGCAGTACTGAAGAATTTCAGGCAATGAAACCAGCTGGTTGGCCTCATCCAATGGTGGTTCCAGCTTCTTCCCCAAAGTCATGTGTCACAAGTTTCAGCAGTAGTAATATGTTGGATTTCTCTAACAATCATGCTGATGCTAAGCCTTCTCTTCCAGATCCATCTTCTGAGTGCAACAGCAGTGCAAGTGGTGGGGCAGTGAAGAAGGCTAGGGTTCAAGCTTCTGGAGTTCAGTCGTCTACCTTTAAGGTCAGGAAGGAGAAGCTCGGTGACAGAATCACAGCCCTTCATCAGCTTGTTTCTCCATTTGGCAAGACTGACACAGCGTCTGTGCTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATCGAGGCTCTTAGCTTACCATACTTGGGCAATGCCACTACTTCATCATCTAACATCAGGCACCATCAACAATCTGCAGTTCAAGGAGAGAATAATTGTATATTCCCGGAAGACCCTGGTCAGCTTCTGCATGAAAACAGCTTGAAGAGGAAAGCTATTGGTAGCAATCCGCAGGAATCAATAGAAGAAGGGAAGAGGGATCTGAGAAGTAGAGGGTTGTGTCTGGTACCAGTGTCGTGCACAATGCAAGTTGGGAGTGATAATGGAGCAGACTATTGGGCACCTGCACTAGGTGCTGGGTTTCGATAA 1044 0.4569 MNSRGHLLHQSSPVQQMMANPNWWNINNMNTIRHQQQPSPFLSSPSNFLPNHHHHLPSWQHDLNSNQHPLPDSWTQLLMGGSVGEEDRGGMGQFQEVNMNASLVDIKQESSVNSYGYGHGSSTEEFQAMKPAGWPHPMVVPASSPKSCVTSFSSSNMLDFSNNHADAKPSLPDPSSECNSSASGGAVKKARVQASGVQSSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGNATTSSSNIRHHQQSAVQGENNCIFPEDPGQLLHENSLKRKAIGSNPQESIEEGKRDLRSRGLCLVPVSCTMQVGSDNGADYWAPALGAGFR 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1970 347 CDD bHLH_AtbHLH_like 198 250 IPR045239 -
Mibi02g1970 347 FunFam transcription factor bHLH68 isoform X1 200 253 - -
Mibi02g1970 347 Gene3D - 199 255 IPR036638 GO:0046983
Mibi02g1970 347 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 46 329 - -
Mibi02g1970 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 203 253 IPR036638 GO:0046983
Mibi02g1970 347 MobiDBLite consensus disorder prediction 163 190 - -
Mibi02g1970 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 193 242 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1970 Mibi-ChrMibi02 20953434 20957048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1970 10 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 40.166 1.56e-51 173