Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1968 ATGTCTGTGCCACAGGACTATGTAGGCTTGACAGAGCTTTCTTCAGTGGAAGAAAGCTCAGACAAGTTTTCTCAGAGAGGTAATGGTGGCTTGAACCTCAAGGCCACTGAGCTTAGACTTGGACTGCCTGGGTCTGAGTCACCGGAGAGGGACGCCGGCGCCGGCAAGAGTGCGGTGGTGTGTAGGGCCAAGAGGGGTTTCTCAGACACCATTAATGGTGGTTCTGGAAAGTGGGGTATGTCAGGAAATGGAGGATCTGAAGTGGGTTTGGGTAAAGATGGTGTCTTGTTCTCTCCCAGAGGTGGTACTAACTCACAAACATGTTTGGTTGCTTCCCTTGCTAAAGATAGCATCCCTAACTCACCTAAACCATTGGTGCATGAGAAGAAGCCTTCTTCCCAGATATCTGCTGTTCCTCCAAAGGAACAAGTTGTGGGGTGGCCACCAATCAGATCTTTCAGGAAGAACTCGATGGCCTCTAATCCTCAGAAGAACGATGATGATGATGATGCAGAGGGCAAGTCTGGATGCCTTTATGTAAAAGTAAGCATGGATGGTGCACCTTACTTGAGGAAAGTGGATCTCAAAAACTTTGCCAGTTACCGCCAACTTTCTTCAGCACTCGAAAAGATGTTCAGATGTTTCACAATCAGTCAGTGTGGATCTCACGGGATTTCGAGTCATGATAATTTGAGTGAGAGCAGGCTGAAGGATCTGCTTCATGGTTCAGAATATGTGCTTACCTATGAAGACAAGGATGGTGACTGGATGCTAGTTGGTGATGTACCCTGGGAGATGTTCACTGCCTCTTGCAAGAGATTGAGGATAATGAAGAGTTCTGAAGCAATTGGCCTGGCACCAAGAGCAATGGAAAAGTGCAAAAGCCGAAACTAG 894 0.4743 MSVPQDYVGLTELSSVEESSDKFSQRGNGGLNLKATELRLGLPGSESPERDAGAGKSAVVCRAKRGFSDTINGGSGKWGMSGNGGSEVGLGKDGVLFSPRGGTNSQTCLVASLAKDSIPNSPKPLVHEKKPSSQISAVPPKEQVVGWPPIRSFRKNSMASNPQKNDDDDDAEGKSGCLYVKVSMDGAPYLRKVDLKNFASYRQLSSALEKMFRCFTISQCGSHGISSHDNLSESRLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTASCKRLRIMKSSEAIGLAPRAMEKCKSRN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1968 297 ProSiteProfiles PB1 domain profile. 177 279 IPR000270 GO:0005515
Mibi02g1968 297 SUPERFAMILY CAD & PB1 domains 175 278 - -
Mibi02g1968 297 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 31 284 IPR003311 GO:0005634|GO:0006355
Mibi02g1968 297 Gene3D - 171 291 - -
Mibi02g1968 297 FunFam Auxin-responsive protein 172 289 - -
Mibi02g1968 297 MobiDBLite consensus disorder prediction 152 172 - -
Mibi02g1968 297 Pfam AUX/IAA family 36 288 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1968 Mibi-ChrMibi02 20901462 20903428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1968 179 295 B3 DNA Binding Superfamily AT1G19850 29.915 2.94e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi02g1968 AUX_IAA 2.1e-85 CL0072