Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi02g1964 | ATGGAACGGATTGTAGGCGCCAAGTATAAGCTTGGCCGTAAGATCGGAAGCGGATCCTTCGGTGAAATCTATCTAGCTACGCATATTGATACTTTCGAGATCGTCGCCGTCAAGATTGAGAATAGTAAAACGAAGCATCCGCAGCTGCTTTATGAGGCAAAACTGTACAATATTCTTCAAGGAGGAAGTGGCATTCCTAGCATAAAATGGTCTGGCGTTGATGGGGAGGAGAATGTGCTTGTTCTTGACTTGCTGGGACCGAGTCTTGAGGATCTGTTTGTGTATTGTGGCAGAAAATTTTCGTTGAAGACAGTCTTAATGCTGGCTGATCAAATGATCACTAGAATAGAATATGTGCACTCTAAGGGATTTTTACATAGGGATATAAAACCTGATAATTTTCTTATGGGACTTGGTCGGAAGGCTAACCAGGTTTACATAATTGATTTTGGTCTTGCAAAAAGGTATCGGGACTCCACCACCAATCGCCACATCCCTTATAGGGAGAACAAAAATTTAACAGGGACTGCACGTTATGCGAGTTGCAATACTCATCTTGGGATTGAACAAAGCCGACGGGATGACTTGGAGTCACTGGGCTATGTTCTTCTGTATTTCTTGAGAGGAAGTCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAGAAGTATGATAAAATATGTGAAAAGAAATTGTCAACTCCCATTGAGGTCCTCTGCAAATCTCATCCTGTAGAGTTTGCTTCATACTTTCACTACTGTCACTCTCTGACTTTTGACCAGCGGCCTGATTATGGATTCTTGAAGCGTGTTTTTCGCGAACTATTTACCCGAGAAGGTTATGATTTTGACTACGTATTTGATTGGACCATCTTGAAGTATCAGCAGGCACAAAAGAACAAACCCCAGCCACGCATACCCCCGATTACTGGAGCAAGCAACAGTCGTGCAATGCCAATGGATGTTGACAACCATCATGGTGACGTAACAGATCGCATCAGATCAGGCAATGCTACTAGTTCTGGTGTTAAATTGCAGTTTAAATCTCCAACGGGCAGAAATTCAAGTTCTGAACATCCTTTTAAGAAGAATATTTTTGGAGAGGAGAATATGCCCTCCACTTCACATGTGCTTTCTGCAGCTGGATTTCATCTCTGCATCGCACCAAATGAAATTCCAGTATGTTGTGAATCTGTTCAAGAAAAGTCTCGTGCATATGTGAAGCTGCAAGTGTGTGGTGGTTCACTGGCCTCTTTTTCTTTGTATTTAATCGAGAATATCCCAGTGATTTATTGA | 1299 | 0.4234 | MERIVGAKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKTKHPQLLYEAKLYNILQGGSGIPSIKWSGVDGEENVLVLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKLSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRVFRELFTREGYDFDYVFDWTILKYQQAQKNKPQPRIPPITGASNSRAMPMDVDNHHGDVTDRIRSGNATSSGVKLQFKSPTGRNSSSEHPFKKNIFGEENMPSTSHVLSAAGFHLCIAPNEIPVCCESVQEKSRAYVKLQVCGGSLASFSLYLIENIPVIY | 432 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi02g1964 | 432 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 326 | - | - | |
| Mibi02g1964 | 432 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 290 | IPR011009 | - | |
| Mibi02g1964 | 432 | SMART | serkin_6 | 9 | 278 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi02g1964 | 432 | Pfam | Protein kinase domain | 9 | 227 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi02g1964 | 432 | MobiDBLite | consensus disorder prediction | 343 | 364 | - | - | |
| Mibi02g1964 | 432 | FunFam | Casein kinase I isoform delta-like | 1 | 340 | - | - | |
| Mibi02g1964 | 432 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
| Mibi02g1964 | 432 | PANTHER | CASEIN KINASE-RELATED | 8 | 331 | - | - | |
| Mibi02g1964 | 432 | ProSiteProfiles | Protein kinase domain profile. | 9 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi02g1964 | 432 | MobiDBLite | consensus disorder prediction | 343 | 362 | - | - | |
| Mibi02g1964 | 432 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
| Mibi02g1964 | 432 | CDD | STKc_CK1_delta_epsilon | 8 | 282 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi02g1964 | Mibi-ChrMibi02 | 20828797 | 20832820 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi02g1964 | 4 | 236 | AGC Kinase Gene Family | AT3G08720 | 25.630 | 3.29e-14 | 72.4 |
Transcription factors information