Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1962 ATGGTCAGAGTAATTCCCATGGCTTCTTCGATTCGGCCTTCTCTCTCCTCCTTCCGCTTAATCGGTGGTTCTCGTCTCTATCCCTCCCTCTCTTCTTGTGCCCCTTCTCGTCGCCTCTCCTTCTCTCATCTTGGCAGCAGCTCTATTCCTCAGTCCCATATCTTTGGCTTGAAAGCACCCAGGCTTTTGAGACGAGATGGTAACTGCAAGGGATTGATAGCAACTGGGATTGTGTGCCAAGCAAGCACAGCTGCTTCGCCAGAAAATGTACTTGAGTGGGTCAAACAAGATAAGAGAAGAATGCTTCATGTCGTTTATCGTGTTGGTGACTTGGACAGGACCATAAAATTTTATACAGAATGCCTGGGAATGAAGCTTCTGAGAAAGCGTGACATACCAGAGGAGAAATACACTAATGCGTTTCTTGGATATGGTCCTGAAGATTCACACTTTGTGATTGAATTGACATACAATTATGGAGTTGACAAGTATGATATTGGAACTGGATTTGGACATTTTGGTATTGCTGTTGAAGATGTTGCAAAAACAGTGGAACTCGTACGGGCCAAGGGTGGCAAAATAACAAGAGAGCCTGGTCCTGTCAAGGGAGGCAAAACAGTGATTGCATTTATTGAAGATCCTGATGGTTATAAGTTCGAACTTTTGGAAAGAGGACCCACACCTGAGCCTTTATGCCAAGTAATGCTTAGAGTGGGTGATCTTCAACGTTCCATTGAATTTTATGAGAAGGCTTTTGGTATGGAGCTTCTTCGGACACGAGATAACCCAGAGTACAAGTATACCATAGCTATGCTTGGTTATGGTCCTGAAGATAAAAGTACTGTTATGGAGCTGACTTACAACTATGGAGTCACTGAATATGACAAGGGAAATGCTTATGCTCAGATTGCAATAGGCACCGATGATGTTTACAAGACAGCTGAAGCTGTTAAACTTGCTGGAGGAAAGATTACCCGGGAACCTGGACCATTACCCGGGATTAACACAAAAATTACGGCATGCTTGGATCCTGATGGTTGGAAGACGGTATTTGTAGATAATGTCGATTTCCTCAAGGAGTTGGAGTAG 1089 0.4389 MVRVIPMASSIRPSLSSFRLIGGSRLYPSLSSCAPSRRLSFSHLGSSSIPQSHIFGLKAPRLLRRDGNCKGLIATGIVCQASTAASPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVRAKGGKITREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLQRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSTVMELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAVKLAGGKITREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKELE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1962 362 CDD GlxI_Ni 231 352 - -
Mibi02g1962 362 Gene3D - 74 225 IPR029068 -
Mibi02g1962 362 TIGRFAM glyox_I: lactoylglutathione lyase 231 354 IPR004361 GO:0004462|GO:0046872
Mibi02g1962 362 TIGRFAM glyox_I: lactoylglutathione lyase 88 233 IPR004361 GO:0004462|GO:0046872
Mibi02g1962 362 FunFam Lactoylglutathione lyase 227 362 - -
Mibi02g1962 362 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 100 224 IPR037523 -
Mibi02g1962 362 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 101 221 IPR004360 -
Mibi02g1962 362 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 233 348 IPR004360 -
Mibi02g1962 362 ProSitePatterns Glyoxalase I signature 1. 233 254 IPR018146 GO:0004462|GO:0046872
Mibi02g1962 362 ProSitePatterns Glyoxalase I signature 2. 167 179 IPR018146 GO:0004462|GO:0046872
Mibi02g1962 362 PANTHER LACTOYLGLUTATHIONE LYASE 81 362 - -
Mibi02g1962 362 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 231 354 IPR029068 -
Mibi02g1962 362 CDD GlxI_Ni 101 222 - -
Mibi02g1962 362 FunFam Lactoylglutathione lyase 97 226 - -
Mibi02g1962 362 Gene3D - 227 362 IPR029068 -
Mibi02g1962 362 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 99 229 IPR029068 -
Mibi02g1962 362 ProSitePatterns Glyoxalase I signature 1. 103 124 IPR018146 GO:0004462|GO:0046872
Mibi02g1962 362 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 230 354 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1962 Mibi-ChrMibi02 20811497 20815871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1962 231 351 Calmodulin-binding Proteins AT1G08110 27.891 1.02e-10 59.3