Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1955 ATGGCTGAGCTTCCCAGCTCAGAGATAGACACAAGCATTCACACTAACTGGTCCTCACACTCTCCATCATCATCTTCATCATCATCCTCATCATCATCTGGGTTATCTCAGTGTTTATCAAAGACATTACCTGAAGAACAGAGGAAGCTGAAACGAGGCAGAGAAAGCAGAAACAGTAAGCACCCTATGTACAGAGGAGTCCGAATGAGAGCATGGGGCAAATGGGTATCCGAAATCCGAGAACCCAGGAAGAAAAACCGGATCTGGCTCGGAACTTTCTCCACGCCGGAGATGGCGGCGCGTGCACATGACGTCGCCGCCTTGGCTATAAAAGGAAACTCTGCTATCCTTAACTTCCCCGAGCTTTCGGGTCATCTGCCCCGACCCGTTTCAAACTCGCCCCGAGATGTCCAGGCCGCCGCAGCCAAAGCCGCCGCCATGGAGGAATTCAGTCCGCCATCGATGTCCTCCTCGTCGTCGTCGTCATCATTGGCAATGTCGGCTTGCTCCGGCGAGGCGTCGACGGTGGAGGAGCTGGGAGAGATAGTGGAGCTACCGGATTTGGGAAGCAGTTTTGAAATACCCGACCCGGGAAATGAGATGGTGTTTTTTGACCCGGTTGATGGGTGGTTATATCCTCACCCATGGTATCATAGCATTTATGATGAAAAGGATGGTGGTGGGTATTTCATTGGGGATGACACATCAATGCAAGAAGCTGAGAGTATTGCTCTGTGTGGATTTGAGGGTTCTTTGTGGCAATATTAA 768 0.5104 MAELPSSEIDTSIHTNWSSHSPSSSSSSSSSSSGLSQCLSKTLPEEQRKLKRGRESRNSKHPMYRGVRMRAWGKWVSEIREPRKKNRIWLGTFSTPEMAARAHDVAALAIKGNSAILNFPELSGHLPRPVSNSPRDVQAAAAKAAAMEEFSPPSMSSSSSSSSLAMSACSGEASTVEELGEIVELPDLGSSFEIPDPGNEMVFFDPVDGWLYPHPWYHSIYDEKDGGGYFIGDDTSMQEAESIALCGFEGSLWQY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1955 255 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Mibi02g1955 255 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Mibi02g1955 255 MobiDBLite consensus disorder prediction 1 62 - -
Mibi02g1955 255 MobiDBLite consensus disorder prediction 8 43 - -
Mibi02g1955 255 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Mibi02g1955 255 MobiDBLite consensus disorder prediction 44 62 - -
Mibi02g1955 255 FunFam Ethylene-responsive transcription factor 2 62 121 - -
Mibi02g1955 255 Pfam AP2 domain 63 112 IPR001471 GO:0003700|GO:0006355
Mibi02g1955 255 SUPERFAMILY DNA-binding domain 63 120 IPR016177 GO:0003677
Mibi02g1955 255 Gene3D AP2/ERF domain 63 121 IPR036955 GO:0003700|GO:0006355
Mibi02g1955 255 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Mibi02g1955 255 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Mibi02g1955 255 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 25 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1955 Mibi-ChrMibi02 20719651 20720418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1955 22 227 AP2-EREBP Transcription Factor Family AT5G11590 57.209 8.75e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi02g1955 AP2 3.6e-13 CL0081