Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1937 ATGGAGAACATATTTGTTTCAGAAGGCAACAACAATAACAACAACATGGGCGCCGCCGCCACGCCCTCCCTCCGACAAGCTCCCAACGACTCCGTAGATTTGGGGGCTTTCGACCTAGACGAGGCTCTCTCCTCCGCCGCCGATTCTTGCCGCCGATTCGCCGTGTCTCAGAGCTTGGTGGCGGCGTTGCCGGCGGCCGGACACGTGGAGGGTGACGCTGTTTGCTCGGTTTGCATGGAAGGCTTTTATCACTCCGACGATGATGGCGGCGGCGGGAACAAGCAAATAGCATGCGGACACGTGTACCACTCTGGCTGCATCACCTCCTGGATCTCTCGCTCCAACTCTTGCCCCCTTTGCCGCTCCCTTATCTTCCTCCACCACTCTCTTTAA 393 0.5802 MENIFVSEGNNNNNNMGAAATPSLRQAPNDSVDLGAFDLDEALSSAADSCRRFAVSQSLVAALPAAGHVEGDAVCSVCMEGFYHSDDDGGGGNKQIACGHVYHSGCITSWISRSNSCPLCRSLIFLHHSL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1937 130 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 124 IPR013083 -
Mibi02g1937 130 MobiDBLite consensus disorder prediction 1 24 - -
Mibi02g1937 130 SUPERFAMILY RING/U-box 59 127 - -
Mibi02g1937 130 SMART ring_2 75 120 IPR001841 -
Mibi02g1937 130 ProSiteProfiles Zinc finger RING-type profile. 75 121 IPR001841 -
Mibi02g1937 130 Pfam Ring finger domain 75 121 IPR001841 -
Mibi02g1937 130 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 50 121 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1937 30 121 C3H Transcription Factor Family AT5G01980 40.404 8.49e-11 56.2