Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1925 ATGTCAAATCTGCATTATGTTTTCAATTTTGTTCTGCTTCTTGTTCTCCTTCTGATGCAAAATCCGACTACAACAATGTGCCGTACGACGGGATTGCAACCAAGGCATTCTACTGTGATATCATCCACGACCAATATGACCCGAATCCGATTCTCAGAACAGCAATTCTTGAGATGGATCAAGTTCGTTGGTGGCCTAAGACACTCAGTTTTTGGGATAGCCAAAAACAAGCTTTTTCCCTCTTACACTTTGCATGTCACCAAGAAGCCTTCTTCTGGACAATTTTCCACAATTCAAGGCGCAATTGATTCTCTTCCATTCTTAAATCTTGTGAGAGTTGTCATAAAGGTCCACGCAGGGGTTTACACGGAGAAAGTGAACATTCCTCCAATGAAATCCTTCATAACCATACAAGGAGCAGGAGCAGACAAAACCATAGTTCAATGGGGAGACACAGCTCAAACAAAAGGGTCAGATGGGAAGCCAATGGGAACCTTTGGATCAGCAACATTTGCTGTGAATGCACCTTATTTCATAGCCAAGAACATCACATTCAAAAACAAAACCCCAGTTCCAGCACCAGGAGCAGTGGGAAAGCAGGCAGTGGCATTGAGAATATCAGCAGACACAGCGACATTCGTGGGATGCAAATTCTTAGGAGCACAAGACACATTGTATGATCATGTGGGAAGACATTACTATAAAGAGTGCTACATAGAGGGTTCAGTGGATTTCATATTCGGGGACGGCCTGTCTCTGTTCGAGAGGTGTCACGTGCATGCGATAGCGCAGAACGTAGGGGCGGTAACAGCACAAGGGAGGAACAGTATATTGGAGGACACAGGGTTTTCATTTGTGCACTGTAAGGTCACGGGTTCAGGGGCACTGTACCTAGGTAGGGCATGGGGTCCCTTCTCTCGCGTGGTCTTCGCTTACACTAATATGGACAACATCATCATTCCCAAAGGCTGGTACAATTGGGGTGACCCTAACCGGGAAATGACTGTGTACTATGGACAATACAAATGCACGGGACCAGGAGCCAAGTATGCAGGCAGAGTATCTTGGTCGAGAGAGCTCACTGATGAGGAAGCTAAGCCTTTTATTTCACTTAGCTTCATTGATGGCTTTGAATGGATCAAATTGTAG 1149 0.4534 MSNLHYVFNFVLLLVLLLMQNPTTTMCRTTGLQPRHSTVISSTTNMTRIRFSEQQFLRWIKFVGGLRHSVFGIAKNKLFPSYTLHVTKKPSSGQFSTIQGAIDSLPFLNLVRVVIKVHAGVYTEKVNIPPMKSFITIQGAGADKTIVQWGDTAQTKGSDGKPMGTFGSATFAVNAPYFIAKNITFKNKTPVPAPGAVGKQAVALRISADTATFVGCKFLGAQDTLYDHVGRHYYKECYIEGSVDFIFGDGLSLFERCHVHAIAQNVGAVTAQGRNSILEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTNMDNIIIPKGWYNWGDPNREMTVYYGQYKCTGPGAKYAGRVSWSRELTDEEAKPFISLSFIDGFEWIKL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1925 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 76 381 - -
Mibi02g1925 382 FunFam Pectinesterase 80 382 - -
Mibi02g1925 382 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
Mibi02g1925 382 Gene3D - 81 382 IPR012334 -
Mibi02g1925 382 Pfam Pectinesterase 89 376 IPR000070 GO:0030599|GO:0042545
Mibi02g1925 382 SUPERFAMILY Pectin lyase-like 80 381 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1925 Mibi-ChrMibi02 20281166 20283316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1925 2 380 Carbohydrate Esterase AT5G47500 42.105 4.91e-101 302