Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1924 ATGGGGAACAAAATTGCTCGCACAACGCAAGTTTCGGCATCGGAGTACTATCTTCATGACCTGCCCTCTACCTACAATCTCGTTTTGAAGGAGGTTTTAGGTCGAGGCCGTTTCTTCAAGTCTATTCAGTGCAAGCATGACGAGGGTTTGGTTCTTGTCAAGGTCTATTTCAAGCGTGGCGACTTCATCGATCTCAAAGAGTACGATGAGCGTCTGAGTCACATTAGAGACATTTTCAATGCCATTGATCACCCTCACGTTTGGCCCTTTCAGTTTTGGCAAGAAACAGACAAAGCAGCATATCTCTTGAGGCAATATTTCTTCCATAATCTACATGATCGACTTAGTACTCGACCTTTTCTCAGTTTTATCGAGAAGAAATGGTTGGCTTTTCAGTTGCTCCTGGCCGTGAAACAGAGCCATGAGAAGGGAATCTGTCATGGTGATATTAAGTGTGAGAATGTGCTGATTACATCCTGGAATTGGCTTTACCTTGCGGACTTTGCATCATTCAAGCCCACTTACATCCCATACAATGACCCCTCGGATTTTTCTTTTTTCTTCGACACTGGTGGAAGAAGGCTCTGTTATCTAGCACCCGAGAGATTTTATGAACATGGAGGGGAGATGCAGGTGGTACAAGATGCTTCATTAAAGCCATCTATGGATATATTTGCAGTTGGGTGTGTAATCGCAGAACTTTTCCTTGAGGGACAACCACTATTTGAACTGTCTCAACTTCTTGCTTATCGCCGAGGACATTATGATCCTAGCCAACATCTTGAGAAGATACCAGATCCTGGAGTTCGTAAAATGATATTGCACATGATTCAACTTGAACCAGAGTCACGATTTTCTGCTGAGAGCTACCTGAAGGAATATGCAGCAGTTGTGTTCCCAACCTATTTCTCACCATTTTTGCATGATTTCTACCGCTGCTGGAGTCCCCTTCATTCAGATATGAAGGTATTATTATGTCAAAGCGCTTTCCAGGAGATACTAAAACAAATGAACAGCAAATCATCTGAGGAGGTGGCTGTTACTTCTGGTGAGCTTTTGGGAGAGGTTGTAGGTAAAGAAAATGTCAATTTTATGAAGGATTCCCTGGTAAGGAGAGATGAGATGGGAAATCGGTTGATTTCTGATCACAATGAACTTCTTGGTGATATCAGTAGCCTACTGAGGGGTGCTAAGAGTCATCACCATTTATCTGGTCCCCGGCATGTAATAGGAAATGCGCCCAATTCTACCCTTTCTGAGAATCTAAAAAATTTGCAATCTCCTGGTGATCTCCTTCAAACTATCTCCAATGCATTCCGAGGAAATGGTCATCCCTTTCTAAAGAACATTACAATGAATGATTTGAATTCATTGATGTCTGATTATGATAGTCAATCTGATACTTTTGGAATGCCTTTCTTACCACTACCAAAGGATAGCATGAGATGTGAAGGCATGGTTTTGATTACTTCTTTGCTCTGCTCCTGCATTCGCAATATCAAGTTGCCTCACTTGAGGAGGGCAGCTGTGCTCTTGTTGAAGGCTTCTGCATTATTTATTGATGATGAAGATCGTTTGCAGCGTGTTATCCCATATGTTATTGCAATGCTTTCTGATCCATCAGCAATTGTGCGTTGTGCTTCCCTAGAGACTTTGTCTGATATTCTGCCCCTTGTCCGAGATTTTCCACCCAGTGATGCAAAGATATTTCCTGAATACATACTTCCAATGCTTTCTATGCTTCCTGATGATCCAGAAGAAAGTGTTAGGATATGTTATGCCAGTAATATAGCTAAGCTGGCACTTACTGCATATGGATTCTTGATACACTCAATAAGTTTGAGTGAGGCAGGTGTACTTGATGAATTGCAGAGGATAAATGGTGATGTTCAACTTTTGCAGCTGAGGAAATCAATTGCAGAGGTTGTCCAAGAACTTGTCATGGGTCCGAAGCAAACACCAAACATTAGAAGAGCTCTCCTTCAGGACATCGGGAAGTTGTGTTATTTCTTTGGTCAGAGGCATAGTAATGACTTTGTCTTACCCATTCTCCCTGCTTTCCTTAATGATCGAGATGAACAATTACGGTCTGTGTTCTATGAGAAGATCGTATATGTTTGCTTTTTTGTGGGCCAAAGAAGTGTAGAAGAATATCTTATACCTTACATTGAGCAGGCTTTAAGTGACACAACGGAGACTGTCGTTGTTAGAGCCTTACATTGTTTGGCCATTCTTTGCAAAAGTGGTTTCTTCAGGAAGAGGATACTGCTTGAAATGATAGGGCGTGCATTTCCTTTACTATGTTATCCCAGTGGATGGGTGCGTAGGTCAGTGGTCTCATTCATTGCTGCTAGCAGCGAGAGCTTGGGTGCAGTAGATTCTTATGTTTATCTTGCTCCTGTTATACGACCCTTCCTCCGCAGACAACCTGTATCTCTAGCTTCTGTTAGGGCCCTTTTTTCGTGTTTAAAGCCTCCTGTCTCAAGACAGGTTTTCCATGAAGTATTGGAGAACTCCAGGAGTTCAGACATGTTAGAAAGACAGAGGAAAATATGGTATAATTCATCATCACAATCTAAACTGTGGGAAATGGATTTACTGAGAAAAGGAATAGATGAGTTGGACTCATTGAAGAGCTGGCCTGACAAGCAACAAGGTCCTGGGGGTCAACAATCCATTGGCACTGGCTTCCAACAGCCATGTCCAACTGATTGTGATGAAACTGACACAAAGTTGAGAAATATGGGGGCCTTTATGCATAATGATTGCAGTATGTTAGGTCATCGTGATCCCCAAGGCTTAGAGAAGTTACAGTTCTCTGGAATGATGTCACCTCAGGTTAGTTGTAGCAGTTTGCCATATGAGAAGTCATCGAATGGCATACCTTTATATTCTTTCAGTGTGGATAGGCGGGCAATGGGAATTCCTCCTGCAGCATCTGATTCTCCACTACAAGTGAATTCATTAGGTATCAGTTCATCCACCATGCCTTGGGTTAGTCCAGTTAGCAAGTCCTTTAATTTGGCTAGTTCAGTTCCAGCTCCAAAGTTTGTTTCAGGTTCTTTAAGCATAAGCAGCGGATCTAAACAGTTCTATCGAGTGGTGCATGAACCAGATGGTAGGGAAAATGAGACAGCCTATATTAATGGCAAAACTCAAGACGTAGGATCATCCACTGATGGCAAAGGTGGTTCAATCTCACTTGAAGATGCAACCAATCAAACTGATGCATCAGGATTTCCATCTTTTGCTCGAGTGTCCATTCCTGACTCTGGTTGGAGGCCCCGTGGGGTTTTGATTGCACACCTCCAAGAACATCGCTCATCTGTGAATGACATAGCAATTTCTACTGATCATAGCTTCTTTGTGAGCACATCTGATGACTCTACGGTCAAGATATGGGATTCTAGGAAGCTGGAAAAGGATATTTCGTTCAGGTCAAGGCTAACTTATCATTTGGATGGGAGCCGCGCACTATGTGCAACAATGCTTCGGGGTTCTGCACAAGTAGTAGTTGGAGCATGTGATGGATTAATTCATATGTTTTCTGTTGATCATATCTCTAGGGGTCTAGGAAATGTTGTTGAGAAGTATTCTGGTGTTGCTGACATCACAAAGAAAGATATAAAGGAAGGCGCCATCCTCAACCTTGTGAACTATCCTGTGGATGCTTATACCATCATGTATAGCACTCAGAACTGTGGTATTCATATATGGGATACTAGGTCAAGTTCTAGTTCATGGACTCGAAAAGTTAATCCTGAGGAGGGCTATATTCCTTCTCTGGTAGTAGGGCCTTGTGGTAATTGGTTTGTATCAGGGTCATCCAGGGGTGTGCTTACTCTTTGGGATCTGAGATTTCTGATACCTGTGAACTCTTGGCAGTATTCTCTCGCTTGCCCTATAGAAAAGATGTGTCTCTTCTTTCCTCCTTCAAATGCCTCTTTATCTTCAACTGTGAGGCCCCTTGTTTACGTGGCTGCAGGTAGCAATGAAGTTTCTCTTTGGAATGCAGAGAATGGTAGCTGCCACCAGGTATTGAAAGTGACCAATTACGACAGTGACACAGAAAAGTCTGAAATGCCTTGGGCCTTGGCTAGACCATCTAACAAGGGAACTTCTAAATCAGATTTGAGGCGAAATGTAAAGTATAGAGTTGATGAGCTAAATGAACCTCCTTCCCATCTTCCTGGTATACGTTCATTGCTTCCCTTGCCAGGGGGTGATTTATTGACCGGTGGTACTGACTTGAAGATACGTCGATGGGATCACTACAGTCCTGACAGAAGTTACTGTATATGTGGACCTGACTTGAAAGGAGTGGGGAATGATGATTTGTATGAAACAAAATCTAGTTTTGGCGTGCAAGTTATACAGGAAACAAAGAGACGTCCTCTTTCAAATAAGTTGACAGCAAAGGCGGTTGTCACAGCTGCTGCCACTGATCCTGCTGGTTGCCACCGCGATTCTATCCTTTCATTGGCTTCTGTCAAGTTAAACCAGAGACTCTTGTTATCAAGTAGTAGAGATGGGGCTATCAAGGTTTGGAAGTAG 4554 0.4275 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDFIDLKEYDERLSHIRDIFNAIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFIEKKWLAFQLLLAVKQSHEKGICHGDIKCENVLITSWNWLYLADFASFKPTYIPYNDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVVQDASLKPSMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGHYDPSQHLEKIPDPGVRKMILHMIQLEPESRFSAESYLKEYAAVVFPTYFSPFLHDFYRCWSPLHSDMKVLLCQSAFQEILKQMNSKSSEEVAVTSGELLGEVVGKENVNFMKDSLVRRDEMGNRLISDHNELLGDISSLLRGAKSHHHLSGPRHVIGNAPNSTLSENLKNLQSPGDLLQTISNAFRGNGHPFLKNITMNDLNSLMSDYDSQSDTFGMPFLPLPKDSMRCEGMVLITSLLCSCIRNIKLPHLRRAAVLLLKASALFIDDEDRLQRVIPYVIAMLSDPSAIVRCASLETLSDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGVLDELQRINGDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGQRHSNDFVLPILPAFLNDRDEQLRSVFYEKIVYVCFFVGQRSVEEYLIPYIEQALSDTTETVVVRALHCLAILCKSGFFRKRILLEMIGRAFPLLCYPSGWVRRSVVSFIAASSESLGAVDSYVYLAPVIRPFLRRQPVSLASVRALFSCLKPPVSRQVFHEVLENSRSSDMLERQRKIWYNSSSQSKLWEMDLLRKGIDELDSLKSWPDKQQGPGGQQSIGTGFQQPCPTDCDETDTKLRNMGAFMHNDCSMLGHRDPQGLEKLQFSGMMSPQVSCSSLPYEKSSNGIPLYSFSVDRRAMGIPPAASDSPLQVNSLGISSSTMPWVSPVSKSFNLASSVPAPKFVSGSLSISSGSKQFYRVVHEPDGRENETAYINGKTQDVGSSTDGKGGSISLEDATNQTDASGFPSFARVSIPDSGWRPRGVLIAHLQEHRSSVNDIAISTDHSFFVSTSDDSTVKIWDSRKLEKDISFRSRLTYHLDGSRALCATMLRGSAQVVVGACDGLIHMFSVDHISRGLGNVVEKYSGVADITKKDIKEGAILNLVNYPVDAYTIMYSTQNCGIHIWDTRSSSSSWTRKVNPEEGYIPSLVVGPCGNWFVSGSSRGVLTLWDLRFLIPVNSWQYSLACPIEKMCLFFPPSNASLSSTVRPLVYVAAGSNEVSLWNAENGSCHQVLKVTNYDSDTEKSEMPWALARPSNKGTSKSDLRRNVKYRVDELNEPPSHLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPDLKGVGNDDLYETKSSFGVQVIQETKRRPLSNKLTAKAVVTAAATDPAGCHRDSILSLASVKLNQRLLLSSSRDGAIKVWK 1517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1924 1517 CDD STKc_Vps15 16 303 - -
Mibi02g1924 1517 SUPERFAMILY WD40 repeat-like 1100 1515 IPR036322 GO:0005515
Mibi02g1924 1517 SMART WD40_4 1144 1183 IPR001680 GO:0005515
Mibi02g1924 1517 SMART WD40_4 1245 1284 IPR001680 GO:0005515
Mibi02g1924 1517 SMART WD40_4 1096 1135 IPR001680 GO:0005515
Mibi02g1924 1517 SMART WD40_4 1385 1423 IPR001680 GO:0005515
Mibi02g1924 1517 SMART WD40_4 1471 1517 IPR001680 GO:0005515
Mibi02g1924 1517 ProSiteProfiles Trp-Asp (WD) repeats profile. 1484 1517 IPR001680 GO:0005515
Mibi02g1924 1517 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1924 1517 MobiDBLite consensus disorder prediction 883 904 - -
Mibi02g1924 1517 Pfam WD domain, G-beta repeat 1099 1135 IPR001680 GO:0005515
Mibi02g1924 1517 Gene3D - 1209 1517 IPR015943 GO:0005515
Mibi02g1924 1517 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1484 1517 - -
Mibi02g1924 1517 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 475 612 - -
Mibi02g1924 1517 Gene3D - 1029 1205 IPR015943 GO:0005515
Mibi02g1924 1517 Gene3D - 482 613 IPR011989 -
Mibi02g1924 1517 SUPERFAMILY Protein kinase-like (PK-like) 26 326 IPR011009 -
Mibi02g1924 1517 ProSiteProfiles HEAT repeat profile. 680 718 IPR021133 -
Mibi02g1924 1517 MobiDBLite consensus disorder prediction 877 904 - -
Mibi02g1924 1517 FunFam Phosphoinositide 3-kinase regulatory subunit 4 1078 1144 - -
Mibi02g1924 1517 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1517 IPR045162 GO:0004674|GO:0016236|GO:0045324
Mibi02g1924 1517 ProSiteProfiles HEAT repeat profile. 529 561 IPR021133 -
Mibi02g1924 1517 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1103 1135 - -
Mibi02g1924 1517 ProSiteProfiles Trp-Asp (WD) repeats profile. 1103 1135 IPR001680 GO:0005515
Mibi02g1924 1517 SUPERFAMILY ARM repeat 281 839 IPR016024 -
Mibi02g1924 1517 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1924 1517 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1924 1517 FunFam Protein kinase family protein / WD-40 repeat family protein 24 347 - -
Mibi02g1924 1517 Gene3D - 614 824 IPR011989 -
Mibi02g1924 1517 Gene3D Transferase(Phosphotransferase) domain 1 22 341 - -
Mibi02g1924 1517 FunFam Protein kinase family protein / WD-40 repeat family protein 613 818 - -
Mibi02g1924 1517 Pfam HEAT repeat 529 557 IPR000357 GO:0005515
Mibi02g1924 1517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1924 31 324 AGC Kinase Gene Family AT3G08730 25.460 1.97e-12 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Mibi02g1924 Pkinase 4.3e-21 CL0016