Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1916 ATGGAGAAGAAGGCTTGGTTGATTCTAGCTTTTGATCTCCTTCTCCTCCTTCATCTTGATGCAGCAAAAGCGGCCTTTGGTGTCGGCGTTGGCATTGGCGTCGGCGTAGGTGTCGGCGGCGGCGGAGGGGTCGTCTGGGTCGGCGGTGGCGGAGGGAGTAACGGCTCGCCGGAGTCTTCTTCATCGCCAAAACGAGACAAAGCTTACACAGCTCTTCAAGCATGGAAGGCTGCTATAACAGAAGACCCATTGGGTATTTTGGAAAGTTGGAATGGTACTAATGTGTGTTCTTATAAAGGTGTGTTTTGTGCTAATCCTGAGGATGCTTCTGGTGAGCCAGTGGTGGCAGGAATAGATCTCAACCATGCGAATCTTAAGGGAAGTCTTGTAAAGGAGCTATCTCTACTCACTGAAATGTCTCTTCTTCATCTAAATAGTAATAGATTTTCAGGTACAGTTCCTGATACATTCAGAGATCTTTCTTCTCTTGAAGAGTTTGATCTCAGCAACAACCTGCTTTCTGGTCCTTTCCCCACAGTGACATTGACAATGCCTAGTCTGGTTTACTTGGATATCAGATTCAATTCTTTTTCTGGACCCCTCCCTGATGATCTTTTCAACAAGAATCTGGATGCTATTTTTCTCAACAATAATCAATTTGAAGGTGAAATCCCCCAAAATTTAGGCAATTCCCCTGCTTCTGTCATCAATTTAGCTAACAACAAGTTAAGTGGGAGTATCCCAGCGAGTTTTGGCTTTATGGGTTCTAGGCTAAAGGAGATTCTCTTCCTTAATAACCAGTTAACTGGGTGTATTCCTGAAGGGGTTGGGATCTTCACACAGATGCAAGTTCTTGATGTGAGCTATAATTCACTGATGGGTCATTTGCCGGATACGATATCCTGTCTTCAAGACATACAAGTTCTGAACTTGGCGCACAACAAGCTTTCTGGGGAATTATCAGACGTGATCTGCTCACTGAGAAACCTGTTGAATCTGACAGTTGCGTATAATTTCTTTTCTGGGTTCAGCCAGGAATGTTCGAGGCTTGTCGTGAGGAATGTGGGTTTTGATTTCTCAGATAATTGCATTCCTGGGAGGAACATGCAGAGACCTCAACCAGAATGTTCTGTGATTCCTGGTGGTGGCTTGAATTGTCTCAGAATCCCAACTCCTAAGCTTGTTTGTGGTTCGCTTTCTGTAAGTCTCTCTAAGAGTACTCATTATCCCACTCCATCTCCATCATCATCATCTTCTTCTTTTTCTTCTTCATCACCTTGA 1281 0.4426 MEKKAWLILAFDLLLLLHLDAAKAAFGVGVGIGVGVGVGGGGGVVWVGGGGGSNGSPESSSSPKRDKAYTALQAWKAAITEDPLGILESWNGTNVCSYKGVFCANPEDASGEPVVAGIDLNHANLKGSLVKELSLLTEMSLLHLNSNRFSGTVPDTFRDLSSLEEFDLSNNLLSGPFPTVTLTMPSLVYLDIRFNSFSGPLPDDLFNKNLDAIFLNNNQFEGEIPQNLGNSPASVINLANNKLSGSIPASFGFMGSRLKEILFLNNQLTGCIPEGVGIFTQMQVLDVSYNSLMGHLPDTISCLQDIQVLNLAHNKLSGELSDVICSLRNLLNLTVAYNFFSGFSQECSRLVVRNVGFDFSDNCIPGRNMQRPQPECSVIPGGGLNCLRIPTPKLVCGSLSVSLSKSTHYPTPSPSSSSSSFSSSSP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1916 426 Pfam Leucine rich repeat 140 196 IPR001611 GO:0005515
Mibi02g1916 426 Pfam Leucine rich repeat N-terminal domain 68 103 IPR013210 -
Mibi02g1916 426 Gene3D Ribonuclease Inhibitor 234 372 IPR032675 -
Mibi02g1916 426 Gene3D Ribonuclease Inhibitor 65 233 IPR032675 -
Mibi02g1916 426 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 58 417 - -
Mibi02g1916 426 FunFam Leucine-rich repeat receptor protein kinase EMS1 248 346 - -
Mibi02g1916 426 MobiDBLite consensus disorder prediction 405 426 - -
Mibi02g1916 426 FunFam Leucine-rich repeat extensin-like protein 1 69 230 - -
Mibi02g1916 426 SUPERFAMILY L domain-like 68 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1916 Mibi-ChrMibi02 20203322 20204602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1916 61 386 Leucine-rich Repeat extension Gene Families AT3G22800 51.070 1.39e-107 324