Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1914 ATGAGTAACATGAGGTCAGTGAATAGTAGTGATCTCATAGATGCCAAGCTTGAAGAGCATCAGTTGTGTGGATCCAAGCAGTGCCCTGGTTGCGGACACAAGTTTGAATCCAAACCGGACTGGTTAGGTCTTCCGGCAGGCGTGAAGTTTGATCCAACCGATCAAGAACTAATCGAACACCTTGAAGCCAAAGTAGAATCCAAGAATATGAAATCTCACCCTTTAATCGATGAGTTCATCCCCACCATCGAAGGAGAAGACGGCATCTGTTATACTCATCCCGAAAAACTCCCAGGAGTTACAAGAGACGGATTAAGCAGGCACTTTTTTCACAGACCATCAAAGGCATACACAACGGGAACAAGAAAGAGAAGAAAAATACAAAACGAGAACGAGATGCAAGGAGGGGAAACAAGGTGGCACAAGACAGGAAAGACAAGGCCAGTGATGGTAAACGGAAAACAAAAAGGGTGCAAGAAGATTCTAGTTCTCTACACCAACTTTGGGAAAAACCGAAAACCTGAAAAAACCAACTGGGTCATGCATCAATACCACCTTGGACAACATGAGGAAGAGAGAGAAGGAGAGCTTGTTGTGTCCAAGATCTTCTACCAAACACAGCCTAGACAGTGTAACTGGTCCGACCGGACCGCCTCCGCCGGAGAACCCGGTGGCGGCGGAGACTATGTTGTTAATGCCAACAGTGGTAGAAGAGATAGTGGGAGTGGGAGTTGTTCTTCTTCTAAGGAGATTAATAACAACAATGTTGTTGTTACAAACAGAGATCATGATCATATGTCGGCTGTCGTAGGGGTTGTTCCTGCTCCTCCCATGTCATCCTACCTTCATCATCACCATCAGCATCATCATGGGTTGGATATTCATCAACAACACAATCTCAAAGCTGACCATTTTGGGTTCATTCCCTTCAGGAAAAGCTTCGACGAGGTGGGAATAGGAGAGGGTTCGATGGGGAGGGATCAGGTGCAGGCATCAGGAGAGGAAGTTAATGAAGCACAAAGGCAACATCATCATCATCATCATCAACACAATCAAGTGGCTCAGAATCATCATCATCAGAATGTGGCGAACGCAGCGTTTCATATAAATAGGCCTTCACTTCCGATCTCAACAATAATCTCTCCACCTCCTCTCCATCACACTTCCATCATCCTCGATGATAACTCCTACCATGTCTCCAGAATTATGCTCCAGCACCAGCAGCATGACAGCTTTCAGCAAGAGGAGCAGCAACATCATAAACTAGGAGGGAGCTCTGCGTCAGGTTTGGAGGAAGTCATCATGGGATGCACTTCATCTTCTGATATTAAAGCGGAATCATCCGTCTCTGTCACAAACCCACAAGAAGCTGAATGGCTCAAATACTCTTACTGGCCCGACCCTGATAACCCGGATCATCATGGGTAA 1428 0.4608 MSNMRSVNSSDLIDAKLEEHQLCGSKQCPGCGHKFESKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNENEMQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEREGELVVSKIFYQTQPRQCNWSDRTASAGEPGGGGDYVVNANSGRRDSGSGSCSSSKEINNNNVVVTNRDHDHMSAVVGVVPAPPMSSYLHHHHQHHHGLDIHQQHNLKADHFGFIPFRKSFDEVGIGEGSMGRDQVQASGEEVNEAQRQHHHHHHQHNQVAQNHHHQNVANAAFHINRPSLPISTIISPPPLHHTSIILDDNSYHVSRIMLQHQQHDSFQQEEQQHHKLGGSSASGLEEVIMGCTSSSDIKAESSVSVTNPQEAEWLKYSYWPDPDNPDHHG 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1914 475 MobiDBLite consensus disorder prediction 213 250 - -
Mibi02g1914 475 Pfam No apical meristem (NAM) protein 45 186 IPR003441 GO:0003677|GO:0006355
Mibi02g1914 475 MobiDBLite consensus disorder prediction 235 250 - -
Mibi02g1914 475 ProSiteProfiles NAC domain profile. 44 205 IPR003441 GO:0003677|GO:0006355
Mibi02g1914 475 MobiDBLite consensus disorder prediction 324 357 - -
Mibi02g1914 475 Gene3D NAC domain 53 209 IPR036093 GO:0003677|GO:0006355
Mibi02g1914 475 SUPERFAMILY NAC domain 39 205 IPR036093 GO:0003677|GO:0006355
Mibi02g1914 475 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 8 350 IPR044799 GO:0003700
Mibi02g1914 475 FunFam NAC domain-containing protein 73 53 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1914 Mibi-ChrMibi02 20176010 20180187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1914 11 472 NAC Transcription Factor Family AT5G56620 49.689 2.49e-129 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi02g1914 NAM 2.8e-24 No_clan