Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1904 ATGGGAAGAGCACCGTGTTGCGACAAAGCAAACGTGAAAAGAGGACCATGGTCTCCTGAGGAAGATGCCACCCTCAAGAACTACCTCCACAAACATGGCACTGCTGGCAATTGGATCTCTCTCCCCAAAAAAGCTGGTCTTAAGCGTTGTGGGAAGAGCTGTCGCCTGAGATGGCTCAACTATCTGAGGCCTCATATCAGGCTTGGAGGTTTCACTGACGATGAAGACAAAATTATCTGCACTCTCTATGCTACCCTCGGAAGCAGATGGTCCCTTATAGCTGCTCAATTGCCTGGAAGAACGGACAATGATGTGAAAAACCATTGGAACACTAAATTGAAGAAAAAGTTCTTTTCAAGAAACGTTTGTAATGGTGTTACTGAGACCACCGGCAACAACATAAGGGAGGGCAATAGTAGTTATGTACCTTTCTTATCCTTTTCCCCTCAAACACCTCAAGGTGATGCTTTTTTGGTGCCTCACAATAAGGATGCAGATTATTGTGTTCCGAATTTGGAACAAAACAAAGCTCCGTTTTCAGGACCAAAACCTCTGCAAACTCAAGTTTCAGGCTTTGGCAACGGTGTTATGATGAATGAAAGCTTCAGTGCTATACCAATGGAAGTTACATCATCATCTTCTTCAAGTTTCTTGGCAGAAAAGAAAGATGATACCAAATGGGGTGGTTTTAAGCATGGTGATCAATATGATGCAATTAGTATGCCTGATTTTGTGTATGATGATCTCTTCATAAGTGGCTTTGCTTCTTATGACCAATGTCTCATCAACGAGCTGTGCTTTCCAAATTAG 810 0.4284 MGRAPCCDKANVKRGPWSPEEDATLKNYLHKHGTAGNWISLPKKAGLKRCGKSCRLRWLNYLRPHIRLGGFTDDEDKIICTLYATLGSRWSLIAAQLPGRTDNDVKNHWNTKLKKKFFSRNVCNGVTETTGNNIREGNSSYVPFLSFSPQTPQGDAFLVPHNKDADYCVPNLEQNKAPFSGPKPLQTQVSGFGNGVMMNESFSAIPMEVTSSSSSSFLAEKKDDTKWGGFKHGDQYDAISMPDFVYDDLFISGFASYDQCLINELCFPN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1904 269 CDD SANT 71 113 IPR001005 -
Mibi02g1904 269 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Mibi02g1904 269 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mibi02g1904 269 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mibi02g1904 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Mibi02g1904 269 CDD SANT 16 62 IPR001005 -
Mibi02g1904 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 117 IPR017930 -
Mibi02g1904 269 FunFam Transcription factor RAX3 7 68 - -
Mibi02g1904 269 Gene3D - 7 68 - -
Mibi02g1904 269 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mibi02g1904 269 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mibi02g1904 269 Gene3D - 70 136 - -
Mibi02g1904 269 PANTHER OS09G0431300 PROTEIN 1 134 - -
Mibi02g1904 269 SMART sant 67 115 IPR001005 -
Mibi02g1904 269 SMART sant 13 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1904 Mibi-ChrMibi02 20065639 20066859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1904 1 130 MYB Transcription Factor Family AT5G57620 70.149 5.07e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g1904 Myb_DNA-binding 2.5e-14 CL0123