Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1880 ATGAAGCGTCAAGTATTAGTAGTGAGAAAAAGTGAAGGTGGAAGAGGTTCAAGCAGGAGTAGTACTGTGAGATATGGTGAGTGTCAGAAGAATCACGCGGCGAATTCAGGCGGACACGCCGTTGACGGTTGCCGGGAATTCATAGCTTCCGCTGAGGAAGCAAATTCTGCTCTTACATGTGCTGCTTGTGGATGCCACAGAAACTTCCACAAGAGATTGGTGGACACTTCTACTACTACCACTGATGAGTCCTCTTCACTTCCTCCTTCAAATTAA 276 0.4674 MKRQVLVVRKSEGGRGSSRSSTVRYGECQKNHAANSGGHAVDGCREFIASAEEANSALTCAACGCHRNFHKRLVDTSTTTTDESSSLPPSN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1880 91 Pfam ZF-HD protein dimerisation region 23 73 IPR006456 -
Mibi02g1880 91 MobiDBLite consensus disorder prediction 1 25 - -
Mibi02g1880 91 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 25 73 IPR006456 -
Mibi02g1880 91 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 19 76 - -
Mibi02g1880 91 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 24 72 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1880 Mibi-ChrMibi02 19813030 19813305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1880 2 79 Zinc finger-homeobox gene family AT1G18835 62.821 3.37e-28 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi02g1880 ZF-HD_dimer 1.3e-26 No_clan