Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1877 ATGGAGGAGAGGAACGAGATGGATAAGATGAACGATGATACCATGTTGCCAGGTTTTAGGTTTCATCCCACGGACGAGGAGCTTGTTGATTTTTACCTCAGAAGAAAGATTCAGCAGAAATCTCTACCTATTGAGCTCATTAAGCAAGTGGATATCTACAAATTTGATCCTTGGGATCTTCCAAAGCTGGCAAGCACTGGGGAGAAAGAGTGGTATTTCTATTGTCCAAGGGATAGGAAATACAGGAACAGTCCAAGACCAAATAGAGTGACAAGAGCTGGTTTTTGGAAAGCCACAGGAACAGACAGGCCTATATACTCATCATCACAAGGCAAGTGCATTGGCTTGAAGAAATCTCTTGTGTTCTACAGAGGCAGAGCAGCCAAAGGCATAAAGACTGATTGGATGATGCACGAGTTTCGCCTCCCTTCTCCGCCGCCTGATTCTTCACCATCTCCTCCACCACCCAAAAACAAAACCATCTCTCCACAGGATTCATGGGCAATTTGTAGGATATTCAAGAAAGCAAACTCCATGTCCATAATGGCACAGAAAGCTTTATCTCATTCTTGGATGGCTCATCCTCAGTTTTCTGAGAGCATAATGGTGTCTGATCATATACTTGCTCACAGTGCAGAGAACTTGTCCTGCGCCACAGAAATAGGATCAACATCAGGAAACAGACAAGAACTATATGAGCAGGTGCCTTGTACTAATTTCTCTGATTTAGATCATGTTGGCTTCAACAAAGCCTCCCATATGGCAGACACCTTCTTGTTCTCTACTTTTGAATCATCAGGGCCTTCTGCCCATATAGGCTTTGAAGGGCCAAACAATAACATGTTTAATGGTGTCTCTGTGGTGAGTACACCTCATGAAGACGTACAGGCAATAAACATGCCTGCATCTGCATTAGCAGAAGCTATTGGGTTTCCCTTCAGCTTGCCTCCAATTTCAAACGATGCTTGGAAGCCTAATAATCTCCTATGGGAATCATCATCATCACCAACAACTTGTCCTAGCGACACATCTACTAATAATAGATGCTGCACTTGA 1056 0.4356 MEERNEMDKMNDDTMLPGFRFHPTDEELVDFYLRRKIQQKSLPIELIKQVDIYKFDPWDLPKLASTGEKEWYFYCPRDRKYRNSPRPNRVTRAGFWKATGTDRPIYSSSQGKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSPPPDSSPSPPPPKNKTISPQDSWAICRIFKKANSMSIMAQKALSHSWMAHPQFSESIMVSDHILAHSAENLSCATEIGSTSGNRQELYEQVPCTNFSDLDHVGFNKASHMADTFLFSTFESSGPSAHIGFEGPNNNMFNGVSVVSTPHEDVQAINMPASALAEAIGFPFSLPPISNDAWKPNNLLWESSSSPTTCPSDTSTNNRCCT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1877 351 SUPERFAMILY NAC domain 10 175 IPR036093 GO:0003677|GO:0006355
Mibi02g1877 351 MobiDBLite consensus disorder prediction 139 163 - -
Mibi02g1877 351 MobiDBLite consensus disorder prediction 144 160 - -
Mibi02g1877 351 FunFam NAC domain-containing protein 35 24 178 - -
Mibi02g1877 351 MobiDBLite consensus disorder prediction 332 351 - -
Mibi02g1877 351 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 225 - -
Mibi02g1877 351 ProSiteProfiles NAC domain profile. 15 175 IPR003441 GO:0003677|GO:0006355
Mibi02g1877 351 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Mibi02g1877 351 Gene3D NAC domain 24 180 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1877 Mibi-ChrMibi02 19777981 19779131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1877 2 210 NAC Transcription Factor Family AT5G39820 59.565 3.83e-94 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi02g1877 NAM 1e-37 No_clan