Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1874 ATGTCTAGCAGAAGGTCAAGGCAACAATCTTCATCAGGTTCTTCATCCATCTCCGATGACCAAATCATTCAACTTGTTTCCAAGTTGCGTCAACTTGTTCCTGAGATTCGCGATACTCGTCGCTCTAACAAGGCATCTGCATCAAAGGTGCTACACGAGACATGCAACTACATAAGAAGCTTAAACAGAGAAGTGGACGACTTGAGCCAGCGACTCTCTCAGTTGTTGGCCACAATCGATGCTGACAGTGCCGAGGCTGCCATCATTAGGAGCCTCATTAATCCTTAA 288 0.4618 MSSRRSRQQSSSGSSSISDDQIIQLVSKLRQLVPEIRDTRRSNKASASKVLHETCNYIRSLNREVDDLSQRLSQLLATIDADSAEAAIIRSLINP 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1874 95 Gene3D - 18 90 IPR036638 GO:0046983
Mibi02g1874 95 FunFam Transcription factor ILI6 5 90 - -
Mibi02g1874 95 PANTHER TRANSCRIPTION FACTOR PRE 1 93 IPR044293 GO:0006355|GO:0040008|GO:0046983
Mibi02g1874 95 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 25 80 IPR036638 GO:0046983
Mibi02g1874 95 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 61 IPR011598 GO:0046983
Mibi02g1874 95 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1874 Mibi-ChrMibi02 19722400 19723507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1874 17 93 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 74.026 1.07e-35 115