Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1871 ATGGCCTTCCCTCCCCACTCCTTCCTTTTCCAGTCCCATGAAGATCATCACGACCACCTCCCTTCCACCTCCATCAACGCCTACCCCTCCTTCACTCCCAACCTCTTCGAAGGGGTTGGAGTACCTTTGATGTTGAAGAGATCCATGTCGTTTTCAGGGATCGAGAATAAGCAGCAACATGAGGATGAAGAGCTTTCGGATGATGGATCTCAGATGATGGGGGAGAAGAAGAAGAGGCTGAACATGGAGCAAGTGAAGGCACTTGAAAAGAGCTTTGAGTTAGGGAATAAGCTTGAGCCTGAGAGAAAAATGCAGTTGGCTAAGGCTTTGGGACTTCAGCCACGGCAGATCGCCATTTGGTTTCAGAATAGAAGGGCTAGATGGAAAACTAAGCAGCTTGAGAAGGAATATGAAGTTCTCAAGAAGAAGTTTGAAGCTCTGAAGGCTGATAATGATGCCCTCAAGGCTCATAACCACAAATTACACTCTGAGTTATTAGCACTAAAGGGGAGAGATTGCTGTGAAGGAGGAAACATGAACCTTAAGAAAGAACCTGAAGTTTGTTGGAGCAATGGGAGTACTGAGAATAGCTCTGATATTAATTTGGATCTCTCGAGATCACAATTCATAACTTCAGTACAGAATGGTAAGAGCCTTATTCCCTCTAATAATAATGCCCTTAAGCCAACCAGCACAACTCAGCTCCTCCAATGCTCATCAAGATCAGAACTTCAAGATGAAAGCTTCTCCAACATGTTTAACAGCGCCGGCGCCGGCGCCGGCGTCGATGAGCATCACAATTTCTGGCCATGGCCGGAGCATGGTCACCATTTTCATTGA 840 0.4619 MAFPPHSFLFQSHEDHHDHLPSTSINAYPSFTPNLFEGVGVPLMLKRSMSFSGIENKQQHEDEELSDDGSQMMGEKKKRLNMEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEVLKKKFEALKADNDALKAHNHKLHSELLALKGRDCCEGGNMNLKKEPEVCWSNGSTENSSDINLDLSRSQFITSVQNGKSLIPSNNNALKPTSTTQLLQCSSRSELQDESFSNMFNSAGAGAGVDEHHNFWPWPEHGHHFH 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1871 279 PRINTS Lambda-repressor HTH signature 102 111 IPR000047 GO:0003677
Mibi02g1871 279 PRINTS Lambda-repressor HTH signature 111 127 IPR000047 GO:0003677
Mibi02g1871 279 Pfam Homeobox associated leucine zipper 131 170 IPR003106 GO:0006355|GO:0043565
Mibi02g1871 279 CDD homeodomain 76 132 IPR001356 GO:0003677
Mibi02g1871 279 SMART HOX_1 74 135 IPR001356 GO:0003677
Mibi02g1871 279 ProSitePatterns 'Homeobox' domain signature. 106 129 IPR017970 GO:0000981|GO:0006355
Mibi02g1871 279 ProSiteProfiles 'Homeobox' domain profile. 71 131 IPR001356 GO:0003677
Mibi02g1871 279 SUPERFAMILY Homeodomain-like 71 133 IPR009057 -
Mibi02g1871 279 Pfam Homeodomain 76 129 IPR001356 GO:0003677
Mibi02g1871 279 FunFam Homeobox-leucine zipper protein ATHB-13 67 135 - -
Mibi02g1871 279 Coils Coil 123 157 - -
Mibi02g1871 279 Gene3D - 68 144 - -
Mibi02g1871 279 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 47 225 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1871 Mibi-ChrMibi02 19670648 19672266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1871 1 273 Homeobox Transcription Factor Family AT3G01220 53.571 1.54e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi02g1871 Homeodomain 9.5e-16 CL0123