Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1855 ATGGAAACCACAGTGATGATTAAAAGGGAAGAGAGCAAAAGGAGCCAACTCATGGCAGAAGATCAGTTCCAAGGACCTCATTATGTCAAGAGACGGCGAAGAGAGCCTTGTCCAGTTGCGCTTAATAACAATGATGCTCCAAGTGATCAGGTGCAACAGCAGCTGAAGCCACAGCTACAGAGTGATCAAAATTTAAGTACTAGCACTATGAAAAGAAGTTCAAGATTTCGTGGTGTGAGCAGACATCGATGGACTGGTCGATTTGAAGCTCACCTGTGGGACAAGCTCTCCTGGAATGTAACACAGAAGAAGAAAGGGAAGCAAGGAGCTTATGATGAAGAAGAATCAGCAGCAAGAGCGTATGATTTAGCTGCACTTAAGTACTGGGGAACATCAACTTTCACTAATTTCCCGATATCAGATTATCAGCAAGAGATAGAGATGATGGAGACCATGACCAAAGAGGAGTACTTGGCTACTTTAAGAAGAAAGAGCAGTGGCTTCTCAAGAGGCGTATCTAAGTACAGAGGCGTTGCAAGGCACCACCATAATGGTAGATGGGAAGCAAGGATAGGGAGAGTGTTTGGAAACAAATACCTCTATCTTGGCACTTATAGCACCCAAGAGGAAGCCGCTCGTGCTTATGACATAGCAGCCATTGAGTACAGAGGGATCCATGCTGTGACAAACTTTGACTTGAGTACTTACATAAGATGGTTGAGACCTACAAGACAAAACATACAAGAACCAATACCTGAATCTCAGGTGGTACAAGAGGATCAGGCAGAAACATCCCCTTCCATCTACACTCCAGAAGAGGAGAAGAAATCCATGGTCCTTCACAGTAATTCTCTCACAGCTTATCTGAACTCCCCTTGCACGCAAGATTTACTTGAAAGCAAAACCCCTTTAATCTCTAGCAGCAACAATAATAAGGCATCTTCTCCTACTGCCCTTGGCCTTCTTTTTCGATCTTCATTATTCAGAGAACTAGTCAAAAGGAACCCAAACATGTCTGCAGATGAAACTGATGGAGAAGACTCAGGGTCAAGGGATTTACCACAGCTGATGAGTGATGGTGAATTAGGCGGGATCTTCTACGACATAGTTGGAAATGATGTCCCGTTTGTTTGCGATCCGAGCAGGTACAACTCAGGATTATAA 1164 0.4399 METTVMIKREESKRSQLMAEDQFQGPHYVKRRRREPCPVALNNNDAPSDQVQQQLKPQLQSDQNLSTSTMKRSSRFRGVSRHRWTGRFEAHLWDKLSWNVTQKKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYQQEIEMMETMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIRWLRPTRQNIQEPIPESQVVQEDQAETSPSIYTPEEEKKSMVLHSNSLTAYLNSPCTQDLLESKTPLISSSNNNKASSPTALGLLFRSSLFRELVKRNPNMSADETDGEDSGSRDLPQLMSDGELGGIFYDIVGNDVPFVCDPSRYNSGL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1855 387 SUPERFAMILY DNA-binding domain 74 140 IPR016177 GO:0003677
Mibi02g1855 387 Pfam AP2 domain 74 130 IPR001471 GO:0003700|GO:0006355
Mibi02g1855 387 Pfam AP2 domain 173 224 IPR001471 GO:0003700|GO:0006355
Mibi02g1855 387 MobiDBLite consensus disorder prediction 335 349 - -
Mibi02g1855 387 FunFam AP2-like ethylene-responsive transcription factor 173 234 - -
Mibi02g1855 387 Gene3D AP2/ERF domain 74 140 IPR036955 GO:0003700|GO:0006355
Mibi02g1855 387 Gene3D AP2/ERF domain 173 234 IPR036955 GO:0003700|GO:0006355
Mibi02g1855 387 CDD AP2 74 140 IPR001471 GO:0003700|GO:0006355
Mibi02g1855 387 CDD AP2 173 234 IPR001471 GO:0003700|GO:0006355
Mibi02g1855 387 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Mibi02g1855 387 PRINTS Ethylene responsive element binding protein signature 214 234 IPR001471 GO:0003700|GO:0006355
Mibi02g1855 387 MobiDBLite consensus disorder prediction 250 268 - -
Mibi02g1855 387 MobiDBLite consensus disorder prediction 1 78 - -
Mibi02g1855 387 MobiDBLite consensus disorder prediction 1 17 - -
Mibi02g1855 387 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 50 306 - -
Mibi02g1855 387 SUPERFAMILY DNA-binding domain 173 234 IPR016177 GO:0003677
Mibi02g1855 387 SMART rav1_2 174 238 IPR001471 GO:0003700|GO:0006355
Mibi02g1855 387 SMART rav1_2 75 144 IPR001471 GO:0003700|GO:0006355
Mibi02g1855 387 MobiDBLite consensus disorder prediction 250 276 - -
Mibi02g1855 387 MobiDBLite consensus disorder prediction 43 74 - -
Mibi02g1855 387 ProSiteProfiles AP2/ERF domain profile. 75 138 IPR001471 GO:0003700|GO:0006355
Mibi02g1855 387 ProSiteProfiles AP2/ERF domain profile. 174 232 IPR001471 GO:0003700|GO:0006355
Mibi02g1855 387 MobiDBLite consensus disorder prediction 335 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1855 Mibi-ChrMibi02 19393389 19395346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1855 55 267 AP2-EREBP Transcription Factor Family AT1G72570 55.963 7.83e-80 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi02g1855 AP2 1.9e-09 CL0081