Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1848 ATGGGTTTTGGGAATAATGCAATTCAAGCTGGAAGTTTGGACGTGGGCAAGTCAAATGGAAGGAAGAAGAAAGATGGCGCAGAGAAGCATAGTGGGTGCTGGGCTAAATTCAGTTGCATCGGAAGTTGCATACCTTCTAGATCAAAGATTGATAACTCCTTAAGCGGTGGTCCAAGCGCTCATAATGTGGAAAACAGGTGTACAAATGAAAACACCAAAGATCGAACAGTTGCTCCTCCAGAGTCCTCCACTACCACTAGTAATGCAGGAAGTATACCCTCAACTCCCAAATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTCACATTCAACGAACTCAAATTGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGCGAAGGAGGGTTTGGTTGTGTCTTCAAGGGTTGGATTGAAGAGAATGGAACTGCACCTGTCAAACCAGGTACTGGTCTCACTGTTGCAGTGAAGACCCTCAACCATGATGGACTTCAGGGTCACAAAGAGTGGCTTGCTGAGCTGAATTATCTTGGTGATCTTGTCCACACTAATCTGGTTAAATTGATTGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTATGAATTTATGCCCCGAGGAAGTTTAGAGAACCATCTCTTTAGAAAAGGGCCCTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTGGGAGCTGCAAAAGGTCTTTCCTTTCTTCATGAAGAAGCTCAGAGGCCCGTAATATATCGAGATTTCAAGACATCTAATATCTTATTAGATGCGGAATACAATGCCAAGCTTTCTGATTTTGGACTTGCCAAAGATGGTCCTGAGGTTGGAAAGACACATGTATCAACCAGAGTTATGGGAACATATGGTTACGCAGCTCCAGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTTTATAGTTTTGGAGTAGTGCTCCTTGAAATGCTTACCGGTCGACGAGCAATTGATAAAAATAGACCAAACGGGGAACACAACCTGGTGGAATGGGCAAGACCTGCACTTGGAGACCGGAGGATGTTCTACCGTATAATTGATCCTCGTCTTGAAGGTCACTTCTCAATTAAAGGTTCACAGAAAGCTGCCCAACTGGCTGCACAATGCCTAAGTCGTGATCCAAAATCTAGACCCATGATGAGTGAAGTTGTTCAAGTTCTTAAGCATTTGCCAAACCTCAAGGATATGGCTATTTCATCTCAACACTTCCAGTTCACGAGAGTAGATCGCACAATGTCTATGCCAAATCCCAAAAATGGCTCAAAAACACAGCTAACATCTGTATCAAGGAAAGGTCAACCTGTAAGGATCTTGTCAAGTCCTAATGCTCCACGTGGCTCTCCATATCATCATTATTCCAAGTCACCAAAACCTAATGGGTGA 1434 0.4296 MGFGNNAIQAGSLDVGKSNGRKKKDGAEKHSGCWAKFSCIGSCIPSRSKIDNSLSGGPSAHNVENRCTNENTKDRTVAPPESSTTTSNAGSIPSTPKFSEELKVSSRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNYLGDLVHTNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRKGPLPLPWSIRMKIALGAAKGLSFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEVGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAIDKNRPNGEHNLVEWARPALGDRRMFYRIIDPRLEGHFSIKGSQKAAQLAAQCLSRDPKSRPMMSEVVQVLKHLPNLKDMAISSQHFQFTRVDRTMSMPNPKNGSKTQLTSVSRKGQPVRILSSPNAPRGSPYHHYSKSPKPNG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1848 477 ProSiteProfiles Protein kinase domain profile. 123 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1848 477 CDD STKc_IRAK 129 407 - -
Mibi02g1848 477 PANTHER OS01G0588500 PROTEIN-RELATED 81 407 - -
Mibi02g1848 477 FunFam Serine/threonine-protein kinase BIK1 91 208 - -
Mibi02g1848 477 ProSitePatterns Protein kinases ATP-binding region signature. 129 161 IPR017441 GO:0005524
Mibi02g1848 477 MobiDBLite consensus disorder prediction 1 28 - -
Mibi02g1848 477 MobiDBLite consensus disorder prediction 428 477 - -
Mibi02g1848 477 MobiDBLite consensus disorder prediction 51 97 - -
Mibi02g1848 477 Gene3D Transferase(Phosphotransferase) domain 1 209 429 - -
Mibi02g1848 477 MobiDBLite consensus disorder prediction 428 453 - -
Mibi02g1848 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Mibi02g1848 477 FunFam Probable serine/threonine-protein kinase PBL8 209 424 - -
Mibi02g1848 477 SUPERFAMILY Protein kinase-like (PK-like) 97 404 IPR011009 -
Mibi02g1848 477 Pfam Protein kinase domain 126 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1848 477 Gene3D Phosphorylase Kinase; domain 1 97 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1848 Mibi-ChrMibi02 19345389 19349725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1848 109 420 Glycoside Hydrolase AT3G07070 55.732 4.17e-116 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi02g1848 Pkinase 3.2e-46 CL0016