Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1839 ATGCAAGAGAAACAGAGTTGGAGAGAGGGAGAGGGAGAGGGAGAGGTGGAAACGATGGAATCTGGACAATGGTTTGCTTCAGCAGGATCCATAATAGCTTCCTTCATGTTCATTTGGGCTATGTTCCAACAATATTTCCCCTACCAAATTCGCAATCAAATCGAAAAATACACTCAAAGGGTTGTCACTTTGGTTTACCCTTACATCCAAATAACATTCCACGAGTTCACCGGTGAGCGTCTCATGCGCAGCGAAGCATACTCCGCCATAGAAAACTACCTCAGCTCACGTGCCTCCACACAAGCCAAGCGTCTCAAAGCCGACATAGGGAAAAACAACCAATCTCTTGTTCTAAGCATGGACGACCACGAAGAAGTTGCAGAGGAATTCAGGGGAGCTAAACTATGGTGGGCTTCAGGCAAGAACACCACAAAATCTCAGTCTATTTCGCTTCATCAAGTCACTGATGAGAAAAGGTACTACAAGCTAACTTTTCACAAACGACATAGAGATTTGATTCTTGGGACATATTTGAATCATGTGATGAAAGAAGGGAAGGCTATTAAGGTTAAAAATAGGCAGAGGAAGCTTTATACTAATAATGGGTCATATTGGAGTCATGTTGTTTTTGAGCATCCAGCTACGTTTCAGACTTTAGCTTTGGACCCAGACAAGAAGGAGGAGATCATTGATGATTTGATCACTTTCAGTAAGAATGAGGAATTCTTTGCTAGAATTGGTAGGGCATGGAAGAGAGGATATTTACTTTATGGTCCTCCTGGAACTGGGAAATCAACAATGATTGCTGCTATGGCCAATCTCTTAGGATATGATCTCTATGATTTGGAATTGACTGCTGTGAGGGATAACACTGAATTGAGGAAGCTGCTGATTGAAACTTCTAGCAAGTCAATAATTGTGATTGAGGATATAGATTGTTCACTTGATTTGACTGGGCAGAGGAGGAAGAAGGAGAGAAAGGAGGGTGAAGAAGAGAACAAAGATCACAAGCAGAAATCAGAAAGAGAGGCTAGAAGTAGTCAGGTCACACTTTCTGGGCTTTTGAACTTCATCGATGGGTTATGGTCTGCTTGTGGTGGAGAAAGACTCATAGTGTTCACCACAAATCATATAGAGAAACTTGATCCTGCTTTGATTAGAAAAGGAAGAATGGATAAGCACATAGAGTTGTCCTATTGTAGCTTCGAGGCGTTTAAGATTCTTGCTGACAATTATCTCAGAATTGAGTCTCACTATTTGTTTCCCAGAATTGGTGAATTGCTTAGTGATGTTAAAATTACACCAGCAGAAGTTGCAGAGCATTTGATGCCCAAGTCTTCTTCTGGGGATTGTGAAGTTCAATTGAGGAGCTTAATTGAAGCTCTTGAAACGACAAGAGAGGAAGAGGCCAGAAAGATTGAAGCTATGGGCAAACAGGAAGATGATGTGACACAGAACAATTCTATGAGTCAAAATCAATAG 1482 0.4143 MQEKQSWREGEGEGEVETMESGQWFASAGSIIASFMFIWAMFQQYFPYQIRNQIEKYTQRVVTLVYPYIQITFHEFTGERLMRSEAYSAIENYLSSRASTQAKRLKADIGKNNQSLVLSMDDHEEVAEEFRGAKLWWASGKNTTKSQSISLHQVTDEKRYYKLTFHKRHRDLILGTYLNHVMKEGKAIKVKNRQRKLYTNNGSYWSHVVFEHPATFQTLALDPDKKEEIIDDLITFSKNEEFFARIGRAWKRGYLLYGPPGTGKSTMIAAMANLLGYDLYDLELTAVRDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRKKERKEGEEENKDHKQKSEREARSSQVTLSGLLNFIDGLWSACGGERLIVFTTNHIEKLDPALIRKGRMDKHIELSYCSFEAFKILADNYLRIESHYLFPRIGELLSDVKITPAEVAEHLMPKSSSGDCEVQLRSLIEALETTREEEARKIEAMGKQEDDVTQNNSMSQNQ 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1839 493 Pfam Domain associated at C-terminal with AAA 46 139 IPR025753 -
Mibi02g1839 493 Gene3D - 206 395 IPR027417 -
Mibi02g1839 493 PANTHER BCS1 AAA-TYPE ATPASE 27 469 - -
Mibi02g1839 493 Pfam ATPase family associated with various cellular activities (AAA) 255 398 IPR003959 GO:0005524|GO:0016887
Mibi02g1839 493 ProSitePatterns AAA-protein family signature. 369 387 IPR003960 GO:0005524|GO:0016887
Mibi02g1839 493 MobiDBLite consensus disorder prediction 321 344 - -
Mibi02g1839 493 Gene3D - 396 463 - -
Mibi02g1839 493 CDD AAA 251 399 - -
Mibi02g1839 493 FunFam AAA-ATPase ASD, mitochondrial 206 395 - -
Mibi02g1839 493 SMART AAA_5 250 401 IPR003593 -
Mibi02g1839 493 MobiDBLite consensus disorder prediction 321 345 - -
Mibi02g1839 493 Coils Coil 459 479 - -
Mibi02g1839 493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 448 IPR027417 -
Mibi02g1839 493 MobiDBLite consensus disorder prediction 472 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1839 Mibi-ChrMibi02 19202671 19205170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1839 225 401 Calmodulin-binding Proteins AT3G56690 27.027 1.11e-10 62.4