Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1837 ATGGACAAGCCCACGCCTGGGAATAATGCTGAACACAGTGATGCTGAATCCGCCATTTCTAGTAGCTTCCGTGACATCAATGTTAGTCTGTGTAGTACTAGTAGTAGCAACATTGAGACCCAGAGGAGCACTGGATCTATGACGGATTGTGAAGTCAGTGAGGGGAGTTTTAGGAGTTTTAGCCCTTCCAAGCCTCATAAGGGGAATGATATTAGGTGGGATGCCATACAATGTGTGAAGGGGAAAGATGGGGAATTGGGTTTGGGGCATTTTAGGCTGTTGAAGAAGTTGGGTTTTGGGGATATTGGGAGTGTGTATTTGGCTGAGCTTAGAGGGATGGGTTGTTTGTTTGCTATGAAGGTTATGGATAAGGGAATGTTGGCTGGTAGGAAGAAATTGGTGAGGGCTCAGACTGAGAGGGACATTTTGAGTTTATTGGACCATCCTTTTCTTCCTTCCCTTTATTCACATTTTGAGACTGAGAAGTTCTCTTGCTTGCTCATGGAGTTTTGCAGTGGTGGGGATCTTCATACCCTCCGCCAGCGCCAGCAGGGCAAGCATTTTACTGAGCAAGCTGCCAGGTTTTATGCTTCTGAAGTGCTTCTTGCTCTGGAGTATCTACACATGATGGGAGTGGTGTACAGAGACTTGAAGCCAGAAAACGTACTGGTAAGAGAAGATGGGCATATTATGCTCTCTGATTTTGACTTGTCACTAAGGTGCTGTGTAAGTCCCACCCTTGTTCAGTCCAGTAAAGAACCATCTTGTCAGATATCTTCCTATTGCATCCAACCATCTTCATGCATAGATCCACCCTGCAAATTACCCGTTTGCGTTGAGCCTTCTTGCCTTCAACCATCTTGCTTCAAGCCCCATTTCTTCACCTCAAAAAAGGCCAAACCAAAGACTGAAAAACACAGCTCAGCCAATTATTCAGATTCATTCCCAGTTCTAATTGCTGAGCCAACTAATGCTCGTTCTATGTCATTTGTTGGCACTCATGAATATCTAGCTCCTGAGATTATAAGAGGTGATGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGTATTTTCTTGTATGAATTGTTGTTTGGGAAGACCCCATTTAAAGGCAATGGGAATCGAGAAACTTTGTTCAACGTTGTGGGTCAAAGTCTTAAGTTTCCTGAAGGATCAAGCATTAGTTTTGCTGCTAAGGATTTGATAAGAGGATTGCTTGTGAAAGATCCACAGAAGAGGCTTGGATACAAAAGAGGAGCCACTGAGATCAAACAACATCATTTCTTTGAAGGTATTAATTGGGCTCTCATCCGCAGTATTCATCCCCCTGAGATCCCAAAACCACTCGATCTTTCATTTATGAATCAAACATCCAAATCACCTTCAGTGCCTCCTTGTGAAAAAGGTGCTGCTACTACTGATTCAGACAGGTCCTCCTCGGGTCCATACTTAGATTTTGAATTCTTTTAG 1473 0.4372 MDKPTPGNNAEHSDAESAISSSFRDINVSLCSTSSSNIETQRSTGSMTDCEVSEGSFRSFSPSKPHKGNDIRWDAIQCVKGKDGELGLGHFRLLKKLGFGDIGSVYLAELRGMGCLFAMKVMDKGMLAGRKKLVRAQTERDILSLLDHPFLPSLYSHFETEKFSCLLMEFCSGGDLHTLRQRQQGKHFTEQAARFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCCVSPTLVQSSKEPSCQISSYCIQPSSCIDPPCKLPVCVEPSCLQPSCFKPHFFTSKKAKPKTEKHSSANYSDSFPVLIAEPTNARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLFGKTPFKGNGNRETLFNVVGQSLKFPEGSSISFAAKDLIRGLLVKDPQKRLGYKRGATEIKQHHFFEGINWALIRSIHPPEIPKPLDLSFMNQTSKSPSVPPCEKGAATTDSDRSSSGPYLDFEFF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1837 490 Gene3D Phosphorylase Kinase; domain 1 90 170 - -
Mibi02g1837 490 MobiDBLite consensus disorder prediction 457 490 - -
Mibi02g1837 490 MobiDBLite consensus disorder prediction 1 20 - -
Mibi02g1837 490 FunFam serine/threonine-protein kinase D6PK-like 325 448 - -
Mibi02g1837 490 Gene3D Transferase(Phosphotransferase) domain 1 171 240 - -
Mibi02g1837 490 PANTHER FLIPPASE KINASE 1-RELATED 30 452 - -
Mibi02g1837 490 FunFam serine/threonine-protein kinase D6PK-like 175 242 - -
Mibi02g1837 490 CDD STKc_phototropin_like 90 451 - -
Mibi02g1837 490 Gene3D Transferase(Phosphotransferase) domain 1 325 448 - -
Mibi02g1837 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Mibi02g1837 490 FunFam Serine/threonine-protein kinase D6PK-like 89 174 - -
Mibi02g1837 490 Pfam Protein kinase domain 92 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1837 490 Pfam Protein kinase domain 327 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1837 490 ProSiteProfiles Protein kinase domain profile. 91 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1837 490 SUPERFAMILY Protein kinase-like (PK-like) 66 460 IPR011009 -
Mibi02g1837 490 SMART serkin_6 91 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1837 Mibi-ChrMibi02 19182151 19184165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1837 51 490 AGC Kinase Gene Family AT5G40030 78.959 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi02g1837 Pkinase 1.5e-36 CL0016