Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1835 ATGGGAAGGCCACCTTGCTGTGATAAATCCAATGTGAAAAGGGGACTTTGGACTCCTGAGGAGGATGCTAAACTACTCGCTTTTGTCTCCAATCATGGCACTGGAAATTGGACTCTGGTTCCTAAGAAGGCTGGGTTAAACAGATGTGGTAAGAGCTGTAGGTTAAGATGGACTAATTATCTAAGACCTGACCTGAAGCATCATAGCTTCACACCCCAAGAGGAAGAGCTCATTATCAACCTTCATCAAGCTATAGGAAGCAGGTGGTCTTTGATTGCAAGGAGACTACCAGGGAGAACAGATAATGATGTGAAGAACCACTGGAACACAAAGCTGAGGAAGAAGCTAATGAAGATGGGAATTGACCCAATTACCCATAGGCCAGTGTCTCAAGTCCTTTCTGATCTGGGAAGCATTAGTTGCCTCTCAACTATAACTACCACTGAAACACAGGCTCCCAAAAACACCACCAACTTATTAATGGTCTCTAATCAATTAGATCAAGAGGTTCAGTCACACAATAATGAAGCTGCCTCTTCTTCTTCATGTTCATCACCATCTTCATCATCATTATCATCATCTTCTTCTTCCAATATCACACAATTAATTAGCTCTCCTCCTCTGGTTGTTACAACTGCTGTTGCTCCTCCTCCTCCTTGCTTTGATTGGAGCGAGTTCCTTCTGAGTGACCCGCTCATGTGTACTGAGTTTCAACAGCTGAACCACTACGACGTCGTCCAGAACCAAAGTCAAGTTTCGAATGATATTAATAACGCAAGTGATGAGGATTCAGTGATGATGAATAGCCAAGTTTGTGATAAGCAACATTGTGAAGAGTCATTTGTGGATGCTATTTTGAACAGAGATAGTGAAATAAGGGCAGCGTTACTCTTAGACGGATCCACTGATTACTAG 915 0.4273 MGRPPCCDKSNVKRGLWTPEEDAKLLAFVSNHGTGNWTLVPKKAGLNRCGKSCRLRWTNYLRPDLKHHSFTPQEEELIINLHQAIGSRWSLIARRLPGRTDNDVKNHWNTKLRKKLMKMGIDPITHRPVSQVLSDLGSISCLSTITTTETQAPKNTTNLLMVSNQLDQEVQSHNNEAASSSSCSSPSSSSLSSSSSSNITQLISSPPLVVTTAVAPPPPCFDWSEFLLSDPLMCTEFQQLNHYDVVQNQSQVSNDINNASDEDSVMMNSQVCDKQHCEESFVDAILNRDSEIRAALLLDGSTDY 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1835 304 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi02g1835 304 FunFam transcription factor MYB80 69 129 - -
Mibi02g1835 304 PANTHER F14D16.11-RELATED 1 298 - -
Mibi02g1835 304 CDD SANT 17 61 IPR001005 -
Mibi02g1835 304 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi02g1835 304 Pfam Myb-like DNA-binding domain 69 110 IPR001005 -
Mibi02g1835 304 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi02g1835 304 Gene3D - 7 67 - -
Mibi02g1835 304 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi02g1835 304 Gene3D - 68 127 - -
Mibi02g1835 304 SMART sant 13 63 IPR001005 -
Mibi02g1835 304 SMART sant 66 114 IPR001005 -
Mibi02g1835 304 MobiDBLite consensus disorder prediction 170 196 - -
Mibi02g1835 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mibi02g1835 304 CDD SANT 69 112 IPR001005 -
Mibi02g1835 304 FunFam Transcription factor RAX3 7 67 - -
Mibi02g1835 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1835 Mibi-ChrMibi02 19152763 19154223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1835 1 292 MYB Transcription Factor Family AT3G28470 48.077 1.96e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi02g1835 Myb_DNA-binding 5.1e-16 CL0123