Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1833 ATGGGCAAAACTTCCCTAAATCTCAGAAACTGCCTTCTTCTTCTATTCTGCTTCTCCTTGAGCTTATGGGGTTTTGCTTCTTCGGAGGTTGAAGATGACGTCAAATGCCTCAAGGGTATACAAGCTTCGTTGGGTGGAGATTCGCTTTCAAACTGGCAATTCAACAACAACACACCAGGATTCATTTGCAAATTCACCGGCGTTACCTGCTGGAACGAGCAACAGAATCGCGTCATCAATTTAGCCCTCAACGGTTTCGGTCTCTCAGGTCAAGTGCCTGAGTCTTTAAAGTACTGTGGTAGCCTTCAAAGACTAGATCTTGGCTCTAACCAAATCTCGGGTACGATCCCTAACGAGATTTGTGTTTGGCTGAGTTATTTGGTGAGTCTTGACTTGTCTTCGAATAGTCTTTCTGGTCCTATTCCCCGTTCGCTTGGGAATTGTTCTTATTTGAATGAGTTAGTGCTTTCTGATAATCAGCTTTCTGGTGTTATACCTGTTGAGATTGGGAGTTTGAGTAGGCTTAGCAAGTTTTCTGTTGCTAATAATCGTCTTGAGGGTGCGATTCCTTCGTCTTTGAGTCGGTTTGATAAGGAGAATTTTCAGGGGAATAGTGAGCTTTGTGGGCATCCTCTTGGACCTAAGTGTGGAGGGTTGAGTAAGAAGAATCTTGCCATTATTATAGCTGCTGGTGTGTTTGGGGCGGCTGCTTCTTTGTTGTTGGCTTTTGGGCTATGGTGGTGGTACCATTTGAGGTTGAATAAGAAGGGTTTTGGAGATAGAGCAAGTGATAATTGGGCTGTGAGATTGAGGGGTTATAAGCTTGTGCAAGTCACTCTTTTCCAAAAACCCATTGTGAAGGTTAAGCTGGGTGATTTGATGGCGGCTACCAATAATTTCAGTGATGAGAACATTCTTACTTCAACAAGAACAGGAACTACTTACAAAGCAGATCTTCCTGATGGGTCAACTCTCGCGGTCAAACGGCTCAGCACATGTAAAATCTTGGAGAAGCTCTTTCGTGTGGAGATGAACAGATTAGGCCTACTCAGGCACCCGAATTTGGCACCGCTTTTGGGATTCTGTGTAGTGGAAGAGGAGAAGTTTCTGGTTTATAAGAACATGTCAAATGGAACCCTCTATTCCTTGTTGCACAAAAATGGCAATGCATTGGACTGGCCCATGAGATTCAGAATAGGATTGGGGGCAGCTAGAGCTCTTGCTTGGCTGCATCATGGGTGCAATCCTCCTATTATACACCAAAATATCTGCTCCAATGTGATTCTTGTTGATGAAGATTTCGATGCTCGTTTGATGGACGCTGGACTTGCCCGGCTTATGACATCTGATTCTGAAGGGTCAAGTTTTGTGAATGGAGACTTGGGGGAAATTGGTTATATAGCTCCAGAAAATCCTAGCACTCTGGTTCCTACACTAAAAGGAGATGTGTATGGACTCGGGGTTGTGCTTTTGGAGTTGGTCACTGGGCAGAAACCTCTTGAGGTCAGCGTTGGAGAGGATGAAGTTAAGGGTAATTTAGTGAATTGGGTGAATATGCTTTCTAATTCTGGTCGCATCAAGGATTGCATTGACAAGGCCATAAGTGGAAAGGGACACGATGATGAGATTTTGCAGTTCCTGAGAATTGCATGTAACTGTGTGGTTTCTAGTCCTAGGGATAGGTTGTCTATGTACCAGGTTTATAATTCGTTGAAGAGTCTGTCTAAGGACCAAAGTTTTTCGGAGCAAGATGATGAATTTCCACTGATCTTCAGGAAGCCTAAAGATGAATCAGCTTAG 1800 0.4389 MGKTSLNLRNCLLLLFCFSLSLWGFASSEVEDDVKCLKGIQASLGGDSLSNWQFNNNTPGFICKFTGVTCWNEQQNRVINLALNGFGLSGQVPESLKYCGSLQRLDLGSNQISGTIPNEICVWLSYLVSLDLSSNSLSGPIPRSLGNCSYLNELVLSDNQLSGVIPVEIGSLSRLSKFSVANNRLEGAIPSSLSRFDKENFQGNSELCGHPLGPKCGGLSKKNLAIIIAAGVFGAAASLLLAFGLWWWYHLRLNKKGFGDRASDNWAVRLRGYKLVQVTLFQKPIVKVKLGDLMAATNNFSDENILTSTRTGTTYKADLPDGSTLAVKRLSTCKILEKLFRVEMNRLGLLRHPNLAPLLGFCVVEEEKFLVYKNMSNGTLYSLLHKNGNALDWPMRFRIGLGAARALAWLHHGCNPPIIHQNICSNVILVDEDFDARLMDAGLARLMTSDSEGSSFVNGDLGEIGYIAPENPSTLVPTLKGDVYGLGVVLLELVTGQKPLEVSVGEDEVKGNLVNWVNMLSNSGRIKDCIDKAISGKGHDDEILQFLRIACNCVVSSPRDRLSMYQVYNSLKSLSKDQSFSEQDDEFPLIFRKPKDESA 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1833 599 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Mibi02g1833 599 Pfam Protein tyrosine and serine/threonine kinase 321 567 IPR001245 GO:0004672|GO:0006468
Mibi02g1833 599 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 261 374 - -
Mibi02g1833 599 ProSiteProfiles Protein kinase domain profile. 300 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1833 599 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Mibi02g1833 599 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 48 574 - -
Mibi02g1833 599 SUPERFAMILY L domain-like 60 199 - -
Mibi02g1833 599 Gene3D Transferase(Phosphotransferase) domain 1 375 596 - -
Mibi02g1833 599 Gene3D Phosphorylase Kinase; domain 1 260 373 - -
Mibi02g1833 599 Gene3D Ribonuclease Inhibitor 33 218 IPR032675 -
Mibi02g1833 599 Pfam Leucine Rich Repeat 101 121 IPR001611 GO:0005515
Mibi02g1833 599 SUPERFAMILY Protein kinase-like (PK-like) 277 571 IPR011009 -
Mibi02g1833 599 FunFam Nuclear pore complex protein NUP107 30 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1833 Mibi-ChrMibi02 19127022 19128821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1833 11 597 Receptor kinase-like Gene Family AT3G28450 62.312 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Mibi02g1833 PK_Tyr_Ser-Thr 1.7e-24 CL0016