Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1827 ATGGATATTGAGCAGGAATCAAGTGTGGCTGCTTTAGCACCATCATCGTCGTCACCACCACCACCACCACCATCGAAGAAGAAGAAGAAGAAAAATGGGTCAATAATTCCATCCATTTTCATGCACGCAGACAGATATGACTGGTTCCTCATGGTACTCGGCGTCATCGGCTCCCTCGGCGATGGCTTCAACACCCCTCTCGTCTTCCTCATCAGTAGCCGCCTCATGAACAATGTCGGCTCCAGTTCCACCACCGATCCCGATTCCTTCACCCATAACATCAACAAGAATGCGGTGAAATTGCTATATTGGGCTGCTGTATCCTTCCTCGCTTGCTTCCTCGAGGGATATTGCTGGACAAGAACAGGGGAAAGGCAAGCAGGGAGAATGAGAGCCAGGTATTTGAAGGCGGTGCTCAGGCAAGACGTCACCTACTTCGATCTGCACGTGACAAGCACGTCCGAGGTCATCACCAGCGTCTCCAACGACAGCCTCGTCATCCAAGATGTTATTGCTGAAAAGGTACCAAACTTCTTGATGAACGTGTTTAAGCTCATCGGAAGCTACGTGGCTTCTTTTGCAATGTTATGGAGGCTAGCGATTGTGGGATTCCCATTTGTAATTCTGCTTCTCATCCCTGCTTTTCTGTACGGAAGGATTCTCATGAGGCTGGCGAGGAAGATGAGTGAGGAGTATAATCAGGCGGGTACAATAGCAGAGCAGGCAATATCTTCTATTAGAACTGTTTATTCCTTCGTGGGAGAAAGCAAGACCATGGCCAGTTTTTCCGATGCTTTACAAGGATCTGTTCGATTGGGTCTGAGGCAGGGATTGGCTAAAGGCTTAACCATAGGAAGCAACGGCATCGTTTTTGCCATATGGTCATTCATGTCCTATTATGGTAGCACCCTCGTCATGTACCACGGCGCTGAGGGCGGCACCGTTTTCGCCGTCGGAGCCTCCCTTGCGGTCGGCGGCTTATCATTGGGGGCGGCTTTATCGAACGTGAAGTACTTCTCGGAGGCGAGTATAGCAGGGAAGAGAATAATAGAAGTGATAAAGAGGGTTCCGAAGATTGATTCAGACAACATGAGTGGTGAGACCCTGGAGAGGGTAACAGGGGAAGTGGAATTCGAACACGTGCAGTTCGCGTACCCGTCGAGGCCAGGAAGCATAATACTGAATGATTTTAGCCTGAGGATTCCAGCAGGGAGGACGGTGGCATTAGTGGGAGGGAGTGGATCAGGGAAATCAACAGTGATATCACTTTTGCAGAGATTTTATGACCCACTTGAGGGAGAGATAAGGCTTGATGGTGTGGGCATTCATAAGATGCAGCTTAAGTGGTTGAGGTCACAGATGGGTCTGGTCAGTCAAGAACCTGTCCTCTTTGCCACAAGCATCAAGGAAAACGTTCTCTTTGGAAAGGAAGATGCTTCCATGGAAGAGGTCATTCTTGCTGCCAAAGCTTCTAATGCTCATAATTTCATCTCTGACCTACCTTTGCGCTATGATACTCAGGTTGGAGAAAGAGGAGTTCAAATGTCAGGGGGACAAAAACAGAGGATAGCCATAGCAAGAGCAATAATAAAGAAACCAAGATTGCTTCTACTAGATGAAGCAACCAGTGCATTAGATTCTGAGTCAGAACGAGTAGTTCAAGAGGCTCTAGACAAAGCAGTCGTGGGTCGCACCACAATCATAATCGCCCACCGTTTATCCACCATCCGAAACGCCGACGTAATCGCCGTCGTCGAAAACGGAAAGATCATGGAAATGGGTTCCCATGACGAGCTCCTCCAAAACGATAATGGCCTTTACACATCGCTGGTTCGTCTTCAACAAAGAGAACAGTTCAAGACCCAACATGAAGATAATGCCTCTATATCAAACAGAGACATGAACAATACTAATAGCCGTAGGCTTTCTCCGGTTAGTCCTTCTAGCTCTGCTAATTCAATTGCGAGAAATCCAACTTCAGTCGCTGATGAAGAAGATGGTCATGTCAAAGAAGATCGGAAATTGCCTGTTCCTTCGTTTAGGAGATTGTTGGCTCTGAATCTTCCTGAATGGAAGCAGGCAACTATGGGGTGTATAAGTGCTGCTCTGTTTGGTGCGGTTCAGCCATTGTATGCATTTGCAATGGGGTCTATGATATCTGTGTATTTCTTGACGGATCATGATGAGATCAAAAGGAAGACCAGGATTTATGTTCTCTGCTTTTTGGGATTGGCTATCTTCTCTCTACTTATTAATATAAGCCAGCATTATTATCTTGCTTATATGGGAGAGTACCTTACCAAAAGGGTTAGAGAGAGAATGCTCTCAAAGATCCTCACTTTTGAAGTCGGATGGTTTGATCAGGACGAAAATTCCAGTGGTGCTATTTGCTCTCGACTTGCCAAAGATGCCAATGTGGTGAGGTCTTTGGTGGGGGACAGAATGGCTCTACTGGTACAATCATGTTCCGCGGTGATATTAGCCTGCACAATGGGGTTGATCATTGCATGGAGGCTAGCCCTTGTTATGATAGCCATTCAGCCTCTCATCATCGCTTGCTTCTACACAAGGCGAGTCCTTCTCAAAAGCATGTCTAGCAAAGCCATTAAAGCCCAAGAGGAAAGCAGCAAGTTAGCCGCAGAAGCTGTTTCAAATCTAAGAACTGTAACTGCCTTCTCTTTACAAGATCGCATATTGAAAATGCTTGAGAAATCCCAAGAAGGCCCAAGCAAAGAGAGTATCCGTCAGTCCTGGTACTCAGGAATAAGCCTGGGCTGTTCCCAGAGCATCATGTCCGTCAGTTGGGCCGTGGACTTTTGGTATGGTGGCAAGCTTATCTCCCAAGGTTACATCAACGCCAAAGCAATGTTTGAAACCTTCATGATCCTGCTCAGCACGGGCCGGGTCATCGCCGACGTTGGAAGCATGACCTCAGACCTCGCCAAAGGCGCCGACTCTGTGGGCTCAGTTTTCGCCGTCCTCGACAAATACACCAAAATTGAGCCCCAACACCGAGACGGGCTCATTCCCGAGAATATAATGGGCCACATCGAGCTCCAGGACGTCCAGTTCGCATACCCGGCCCGGCCCGACGTGACCATATTCAAAGGGTTCTCCCTTACAATCGATGCTGGGAAATCAATAGCACTAGTGGGCCCAAGTGGGTCGGGCAAATCCACCATAATCGGGCTTATAGAGAGATTCTATGACCCACAAAAAGGAACAGTGACCATCGATGGAAAAGACATACGTTGGTATCAACTTAGATCACTAAGGAAACACATAGCGTTAGTGTCTCAAGAGCCAACATTGTTCAGTGGGACCATAAGAGCGAACATTGCATATGGATCATCGGATAAGGTGACCGAATCGGAGATCATAGAGGCGGCGAGAGCAGCGAACGCTCATGATTTCATAGGGAGCTTAAAGGACGGCTACGATACGTCGTGTGGGGACAGGGGAGTGCAGCTATCGGGAGGGCAGAAGCAGAGGATAGCGATAGCGAGGGCGATATTGAAGAATCCGAGGGTGTTGCTATTAGATGAGGCGACGAGTGCTTTGGATATCCCATCGGAGAAGGTGGTGCAGGAAGCATTGGAGAGAGTAATGGTGGGAAGGACAAGTGTGGTGGTGGCCCACAGGTTGAGTACCATACAGAATTGTGATGTGATTGCGGTTTTGGATGAAGGGAGAGTGGTGGAGAAAGGGACACATTCGTTTTTGTTGGGTAAAGGATCCATTGGAGCTTATCATTCTCTGGTGGCTCTTCAGAGAACGCCGCCGTCGAACGTCAATCTCTGCATTGAAGGAGGAATACCTAGGTGA 3825 0.4805 MDIEQESSVAALAPSSSSPPPPPPSKKKKKKNGSIIPSIFMHADRYDWFLMVLGVIGSLGDGFNTPLVFLISSRLMNNVGSSSTTDPDSFTHNINKNAVKLLYWAAVSFLACFLEGYCWTRTGERQAGRMRARYLKAVLRQDVTYFDLHVTSTSEVITSVSNDSLVIQDVIAEKVPNFLMNVFKLIGSYVASFAMLWRLAIVGFPFVILLLIPAFLYGRILMRLARKMSEEYNQAGTIAEQAISSIRTVYSFVGESKTMASFSDALQGSVRLGLRQGLAKGLTIGSNGIVFAIWSFMSYYGSTLVMYHGAEGGTVFAVGASLAVGGLSLGAALSNVKYFSEASIAGKRIIEVIKRVPKIDSDNMSGETLERVTGEVEFEHVQFAYPSRPGSIILNDFSLRIPAGRTVALVGGSGSGKSTVISLLQRFYDPLEGEIRLDGVGIHKMQLKWLRSQMGLVSQEPVLFATSIKENVLFGKEDASMEEVILAAKASNAHNFISDLPLRYDTQVGERGVQMSGGQKQRIAIARAIIKKPRLLLLDEATSALDSESERVVQEALDKAVVGRTTIIIAHRLSTIRNADVIAVVENGKIMEMGSHDELLQNDNGLYTSLVRLQQREQFKTQHEDNASISNRDMNNTNSRRLSPVSPSSSANSIARNPTSVADEEDGHVKEDRKLPVPSFRRLLALNLPEWKQATMGCISAALFGAVQPLYAFAMGSMISVYFLTDHDEIKRKTRIYVLCFLGLAIFSLLINISQHYYLAYMGEYLTKRVRERMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRMALLVQSCSAVILACTMGLIIAWRLALVMIAIQPLIIACFYTRRVLLKSMSSKAIKAQEESSKLAAEAVSNLRTVTAFSLQDRILKMLEKSQEGPSKESIRQSWYSGISLGCSQSIMSVSWAVDFWYGGKLISQGYINAKAMFETFMILLSTGRVIADVGSMTSDLAKGADSVGSVFAVLDKYTKIEPQHRDGLIPENIMGHIELQDVQFAYPARPDVTIFKGFSLTIDAGKSIALVGPSGSGKSTIIGLIERFYDPQKGTVTIDGKDIRWYQLRSLRKHIALVSQEPTLFSGTIRANIAYGSSDKVTESEIIEAARAANAHDFIGSLKDGYDTSCGDRGVQLSGGQKQRIAIARAILKNPRVLLLDEATSALDIPSEKVVQEALERVMVGRTSVVVAHRLSTIQNCDVIAVLDEGRVVEKGTHSFLLGKGSIGAYHSLVALQRTPPSNVNLCIEGGIPR 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1827 1274 SMART AAA_5 1044 1237 IPR003593 -
Mibi02g1827 1274 SMART AAA_5 403 589 IPR003593 -
Mibi02g1827 1274 Pfam ABC transporter 1036 1185 IPR003439 GO:0005524
Mibi02g1827 1274 ProSitePatterns ABC transporters family signature. 1157 1171 IPR017871 GO:0005524|GO:0016887
Mibi02g1827 1274 FunFam Putative ABC transporter B family member 8 660 1005 - -
Mibi02g1827 1274 PANTHER ABC TRANSPORTER B FAMILY 25 753 - -
Mibi02g1827 1274 Pfam ABC transporter transmembrane region 696 966 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g1827 1274 Pfam ABC transporter transmembrane region 52 317 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g1827 1274 ProSitePatterns ABC transporters family signature. 515 529 IPR017871 GO:0005524|GO:0016887
Mibi02g1827 1274 Gene3D - 366 615 IPR027417 -
Mibi02g1827 1274 SUPERFAMILY ABC transporter transmembrane region 40 360 IPR036640 GO:0005524|GO:0016020
Mibi02g1827 1274 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1017 1254 IPR003439 GO:0005524
Mibi02g1827 1274 FunFam ABC transporter B family member 4 366 623 - -
Mibi02g1827 1274 CDD ABC_6TM_Pgp_ABCB1_D2_like 684 1000 - -
Mibi02g1827 1274 CDD ABC_MTABC3_MDL1_MDL2 376 614 - -
Mibi02g1827 1274 FunFam ABC transporter B family member 4 1007 1263 - -
Mibi02g1827 1274 MobiDBLite consensus disorder prediction 1 32 - -
Mibi02g1827 1274 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 52 341 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g1827 1274 Pfam ABC transporter 394 543 IPR003439 GO:0005524
Mibi02g1827 1274 Gene3D - 1007 1263 IPR027417 -
Mibi02g1827 1274 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 376 612 IPR003439 GO:0005524
Mibi02g1827 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1008 1255 IPR027417 -
Mibi02g1827 1274 MobiDBLite consensus disorder prediction 620 670 - -
Mibi02g1827 1274 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 697 982 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g1827 1274 CDD ABC_MTABC3_MDL1_MDL2 1017 1257 - -
Mibi02g1827 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 614 IPR027417 -
Mibi02g1827 1274 FunFam ABC transporter B family member 1 38 375 - -
Mibi02g1827 1274 Gene3D ABC transporter type 1, transmembrane domain 39 986 IPR036640 GO:0005524|GO:0016020
Mibi02g1827 1274 SUPERFAMILY ABC transporter transmembrane region 676 996 IPR036640 GO:0005524|GO:0016020
Mibi02g1827 1274 MobiDBLite consensus disorder prediction 628 659 - -
Mibi02g1827 1274 CDD ABC_6TM_Pgp_ABCB1_D1_like 51 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1827 Mibi-ChrMibi02 19068977 19076641 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1827 20 1264 Calmodulin-binding Proteins AT2G36910 43.430 0.0 1045