Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1826 ATGGATGGTGATCAGGAATTAAGTGTGGGTGCATCATCATCATCATCATCACCATCGAAGAAGAAGAAAAATGGGTCAATAATTCCATCCATTTTCATGCACGCAGACAGATATGACTGGTTCCTCATGGTACTCGGCGTCATCGGCTCCCTCGGCGATGGTTTCAACACCCCTCTCGTCCTACTCCTCAGTAGCCGCCTCATGAACAATATTGGCTCTAGTTCCATCACCGATCCCAACTCCTTCACCCATAACATCAACAAGAATGCGGTGAAATTGCTATATGTGGCTGCTAGTTCCTTCATTGCTTGCTTCCTCGAGGGATATTGCTGGACAAGAACAGGGGAAAGGCAAGCTGCGAGAATGAGAGCCAGATATTTGAAGGCGGTGCTCAGGCAAGACGTCACCTACTTCGATCTGCACGTGACAAGCACGTCCGAGGTCATCACCAGTGTCTCCAACGACAGCCTAGTCATCCAAGATGCTATTGCTGAAAAGGTACCAAACTTCTTGGTGAACGTGTTTATGTTCATTGGGAGCTATGTAGCTGCTTTCGCAATGTTATGGAGGCTAGCGATTGTGGGATTCCCATTTGTACTACTGCTTGTGATCCCTGGATTACTGTACGGAAGGACTCTGATGGGGTTGGCGAGGAAGATGAGGGAGGAGTATAATCAGGCGGGTACAATAGCAGAGCAGGCAATATCTTCCATTAGAACTGTTTATTCCTTCGTGGGAGAAAGCAAGACCATAGCCAGTTTTTCCGATGCTTTACAAGGATCTGTTCGATTGGGTCTGAGGCAGGGATTAGCTAAAGGCTTAGCCATAGGAAGCAACGGCGTCGTTTTTGCCATGTGGTCCTTCATGTCCTATTATGGTAGCCGCCTAGTCATGTACCACGGTGCTAAGGGCGGTACCGTTTTCGCCGTTGGAGCCTCCATCGCCGTCGGTGGCCTATCTTTAGGGTCGGCTTTATCGAACGTGAAGTATTTCTCGGAGGCGAGTACAGCAGGGGAGAGAATAATGGAAGTGATAAAGAGGGTTCCAAAGATTGACTCCGACAACATGAGTGGTGAGACCCTGGAGAGGGTAACAGGGGAAGTGGAATTCGAACACGTGCAATTCGCGTACCCGTCGAGGCCAGGGAGCATAATACTGAATGATTTTAGTCTGAGGATTCCAGCAGGGAGGACGGTGGCATTAGTGGGAGGGAGTGGATCAGGGAAATCAACAGTGATATCACTTTTGCAGAGATTTTATGACCCACTTGAGGGAGAGATACGGCTTGATGGTGTGGGCATTCACAGGATGCAGCTTAAGTGGCTAAGGTCACAGATGGGTCTGGTCAGTCAAGAACCTGCCCTCTTTGCCACGAGCATCAAGGAGAACGTTCTCTTTGGAAAGGAAGATGCTTCCATGGAAGAGGTCATTCTTGCTGCCAAAGCTTCTAATGCCCATAATTTCATCTCACACCTCCCTCTTGGCTATGATACTCAGGTTGGTGAAAGAGGAATTCAAATGTCAGGGGGCCAAAAACAGAGAATAGCCATAGCAAGAGCAATAATAAAGAAACCAAGATTGCTTCTACTAGATGAAGCAACCAGTGCATTAGATTCTGAGTCAGAACGAGTTGTTCAAGAAGCTCTAGACAAAGCAGCAGTGGGTCGCACCACAATAATCATAGCCCACCGTTTATCCACCATCCGAAACGCAGATGTAATCGCCGTCGTCCAGAATGGTAAGATCATGGAAATGGGTTCCCATGACGAGCTCATCCAAAACGACAATGGCCTTTACACATCTCTAGTTCGTCTTCAACAGACAGAACAGTTCAAGACCCAACATGAAGATAATGTCTCTGCCCTTTCGTCTATATCAAACAGAGACATGAACAATACTAGTAGCCGTAGGCTTTCTTTGGTTAGTCGTTCTAGCTCTGCTAATTCAATAGCGAGAAATCCAGCTTCGGTTGCTGATGAAGAAGATGGTCATGTCAAAGAAGATCAGAAATTGCCTGTTCCTTCGTTTAGGAGATTGTTGGCTCTGAATCTTCCTGAATGGAAGCAGGCAACTATGGGGTGTATAAGTGCTGCTCTGTTTGGTGCGGTTCAGCCATTGTATGCATTTGCAATGGGGTCGATGATATCTGTGTATTTCTTGACGGATCATGATGAGATTAAAAGGAAGACCAGGATTTATGCTCTCTGCTTCGTGGGGTTGGCTATCTTCTCTTTACTCATTAATATAAGCCAGCATTATTATTTTGCTTATATGGGAGAGTACCTTACCAAAAGGGTTAGAGAGAGAATGCTCTCCAAGATCCTCACTTTTGAAGTCGGATGGTTCGATCAGGACGAAAATTCCAGTGGTGCTATTTGCTCTCGACTTGCCAAAGATGCCAATGTGGTGAGGTCTTTGGTGGGGGATAGGATGGCTCTACTAGTACAAACATGTTCAGCAGTGACATTAGCCTGCACAATGGGGTTGGTCATTTCATGGAGGCTAGCCCTTGTTATGATAGCCATTCAGCCTCTCATCATTACTTGCTTCTACACAAGGCGAGTCCTTCTCAAAAGCATGTCTAGCAAAGCCATAAAAGCCCAAGAGGAAAGCAGCAAGTTAGCTGCAGAAGCTGTGTCAAATCTAAGAACTGTTACTGCCTTCTCTTCACAAGATCGAATATTGAAAATGCTCGAGAAAGCCCAAGAAGGCCCAAGCAAAGAGAGTATCCGTCAGTCCTGGTACGCAGGAATAGGCTTGGGCTGTTCCCAAGGCATCATGTCATGTACTTGGCCCTTAGACTTTTGGTATGGTGGCAAGCTTATCTCCCGAGGTTACATAAACTCAAAGGCAATGTTCGAAACCTTCATGATCTTGGTCAGCACGGGCCGGGTCATCGCGGACGCCGGAAGCATGACCTCGGATCTCGCCAAGGGCGCCGACTCAGTTGGCTCTGTTTTCTCCATCCTTGACAAATACACCAAGATCGAGCCCGAAGACCCAGACGGGCTCACACCCGAGAAAATAATGGGCCACATCGAGCTCCGGGACGTCCACTTTGCATACCCGGCCCGGCCTGATGTGACCTTATTCGAAGGGTTCTCACTAAAAATCGACACAGGGAAATCAACAGCACTAGTGGGCCAAAGCGGTTCAGGAAAATCCACCATAATTGGGCTTATAGAGAGATTCTACGATCCGCAAAAAGGAACAGTAACCATCGATGGAAAAGACATACGTTCATATCAACTCAGATCACTGAGAAAACACATAGCATTGGTGAGTCAAGAGCCAACACTGTTCAGTGGGACCATAAGAGAGAACATCGCATATGGATCGTCAGATAAGGTAACCGAATCGGAGATCGTAGAGGCGGCGAGAGCAGCGAACGCTCACGATTTCATTGGGAGCTTAAAGGACGGCTACGATACGTCATGTGGGGACAGGGGAGTGCAGTTATCGGGAGGGCAAAAGCAGAGGATTGCGATAGCGAGGGCGATATTGAAGAATCCAACGGTGTTGCTGTTAGATGAGGCAACGAGCGCGTTAGATAGCCAATCAGAGAAGGTGGTGCAAGAAGCATTGGAGAGAGTAATGGTGGGAAGGACAAGTGTGGTGGTGGCCCACAGGTTAAGTACTATACAGAATTGTGATATGATTGCGGTTTTGGATAAAGGGAAAGTGGTGGAGAAAGGGACACATTCGTCTTTGTTGGGTAAAGGACCCTCCGGAGCTTATCATTCTCTTGTGAATATTCAAAGAACACCGCAAATTTAA 3777 0.4731 MDGDQELSVGASSSSSSPSKKKKNGSIIPSIFMHADRYDWFLMVLGVIGSLGDGFNTPLVLLLSSRLMNNIGSSSITDPNSFTHNINKNAVKLLYVAASSFIACFLEGYCWTRTGERQAARMRARYLKAVLRQDVTYFDLHVTSTSEVITSVSNDSLVIQDAIAEKVPNFLVNVFMFIGSYVAAFAMLWRLAIVGFPFVLLLVIPGLLYGRTLMGLARKMREEYNQAGTIAEQAISSIRTVYSFVGESKTIASFSDALQGSVRLGLRQGLAKGLAIGSNGVVFAMWSFMSYYGSRLVMYHGAKGGTVFAVGASIAVGGLSLGSALSNVKYFSEASTAGERIMEVIKRVPKIDSDNMSGETLERVTGEVEFEHVQFAYPSRPGSIILNDFSLRIPAGRTVALVGGSGSGKSTVISLLQRFYDPLEGEIRLDGVGIHRMQLKWLRSQMGLVSQEPALFATSIKENVLFGKEDASMEEVILAAKASNAHNFISHLPLGYDTQVGERGIQMSGGQKQRIAIARAIIKKPRLLLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIRNADVIAVVQNGKIMEMGSHDELIQNDNGLYTSLVRLQQTEQFKTQHEDNVSALSSISNRDMNNTSSRRLSLVSRSSSANSIARNPASVADEEDGHVKEDQKLPVPSFRRLLALNLPEWKQATMGCISAALFGAVQPLYAFAMGSMISVYFLTDHDEIKRKTRIYALCFVGLAIFSLLINISQHYYFAYMGEYLTKRVRERMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRMALLVQTCSAVTLACTMGLVISWRLALVMIAIQPLIITCFYTRRVLLKSMSSKAIKAQEESSKLAAEAVSNLRTVTAFSSQDRILKMLEKAQEGPSKESIRQSWYAGIGLGCSQGIMSCTWPLDFWYGGKLISRGYINSKAMFETFMILVSTGRVIADAGSMTSDLAKGADSVGSVFSILDKYTKIEPEDPDGLTPEKIMGHIELRDVHFAYPARPDVTLFEGFSLKIDTGKSTALVGQSGSGKSTIIGLIERFYDPQKGTVTIDGKDIRSYQLRSLRKHIALVSQEPTLFSGTIRENIAYGSSDKVTESEIVEAARAANAHDFIGSLKDGYDTSCGDRGVQLSGGQKQRIAIARAILKNPTVLLLDEATSALDSQSEKVVQEALERVMVGRTSVVVAHRLSTIQNCDMIAVLDKGKVVEKGTHSSLLGKGPSGAYHSLVNIQRTPQI 1258
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1826 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 606 IPR027417 -
Mibi02g1826 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1013 1250 IPR003439 GO:0005524
Mibi02g1826 1258 ProSitePatterns ABC transporters family signature. 1153 1167 IPR017871 GO:0005524|GO:0016887
Mibi02g1826 1258 Pfam ABC transporter transmembrane region 44 310 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g1826 1258 Pfam ABC transporter transmembrane region 692 961 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g1826 1258 MobiDBLite consensus disorder prediction 1 24 - -
Mibi02g1826 1258 CDD ABC_MTABC3_MDL1_MDL2 1013 1253 - -
Mibi02g1826 1258 Pfam ABC transporter 1033 1181 IPR003439 GO:0005524
Mibi02g1826 1258 MobiDBLite consensus disorder prediction 7 24 - -
Mibi02g1826 1258 Pfam ABC transporter 386 535 IPR003439 GO:0005524
Mibi02g1826 1258 FunFam ABC transporter B family member 1 30 367 - -
Mibi02g1826 1258 SUPERFAMILY ABC transporter transmembrane region 32 352 IPR036640 GO:0005524|GO:0016020
Mibi02g1826 1258 CDD ABC_MTABC3_MDL1_MDL2 368 606 - -
Mibi02g1826 1258 Gene3D - 358 607 IPR027417 -
Mibi02g1826 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 44 333 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g1826 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 693 978 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi02g1826 1258 FunFam ABC transporter B family member 4 358 614 - -
Mibi02g1826 1258 ProSitePatterns ABC transporters family signature. 507 521 IPR017871 GO:0005524|GO:0016887
Mibi02g1826 1258 SUPERFAMILY ABC transporter transmembrane region 672 998 IPR036640 GO:0005524|GO:0016020
Mibi02g1826 1258 Gene3D - 1003 1257 IPR027417 -
Mibi02g1826 1258 FunFam ABC transporter B family member 4 1003 1257 - -
Mibi02g1826 1258 PANTHER ABC TRANSPORTER B FAMILY 14 749 - -
Mibi02g1826 1258 Gene3D ABC transporter type 1, transmembrane domain 31 982 IPR036640 GO:0005524|GO:0016020
Mibi02g1826 1258 SMART AAA_5 395 581 IPR003593 -
Mibi02g1826 1258 SMART AAA_5 1040 1233 IPR003593 -
Mibi02g1826 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1002 1253 IPR027417 -
Mibi02g1826 1258 FunFam Putative ABC transporter B family member 8 656 1001 - -
Mibi02g1826 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 368 604 IPR003439 GO:0005524
Mibi02g1826 1258 MobiDBLite consensus disorder prediction 644 666 - -
Mibi02g1826 1258 CDD ABC_6TM_Pgp_ABCB1_D2_like 680 996 - -
Mibi02g1826 1258 CDD ABC_6TM_Pgp_ABCB1_D1_like 43 341 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi02g1826 Mibi-ChrMibi02 18959235 18966002 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1826 18 1254 Calmodulin-binding Proteins AT2G36910 44.533 0.0 1071