Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi02g1826 | ATGGATGGTGATCAGGAATTAAGTGTGGGTGCATCATCATCATCATCATCACCATCGAAGAAGAAGAAAAATGGGTCAATAATTCCATCCATTTTCATGCACGCAGACAGATATGACTGGTTCCTCATGGTACTCGGCGTCATCGGCTCCCTCGGCGATGGTTTCAACACCCCTCTCGTCCTACTCCTCAGTAGCCGCCTCATGAACAATATTGGCTCTAGTTCCATCACCGATCCCAACTCCTTCACCCATAACATCAACAAGAATGCGGTGAAATTGCTATATGTGGCTGCTAGTTCCTTCATTGCTTGCTTCCTCGAGGGATATTGCTGGACAAGAACAGGGGAAAGGCAAGCTGCGAGAATGAGAGCCAGATATTTGAAGGCGGTGCTCAGGCAAGACGTCACCTACTTCGATCTGCACGTGACAAGCACGTCCGAGGTCATCACCAGTGTCTCCAACGACAGCCTAGTCATCCAAGATGCTATTGCTGAAAAGGTACCAAACTTCTTGGTGAACGTGTTTATGTTCATTGGGAGCTATGTAGCTGCTTTCGCAATGTTATGGAGGCTAGCGATTGTGGGATTCCCATTTGTACTACTGCTTGTGATCCCTGGATTACTGTACGGAAGGACTCTGATGGGGTTGGCGAGGAAGATGAGGGAGGAGTATAATCAGGCGGGTACAATAGCAGAGCAGGCAATATCTTCCATTAGAACTGTTTATTCCTTCGTGGGAGAAAGCAAGACCATAGCCAGTTTTTCCGATGCTTTACAAGGATCTGTTCGATTGGGTCTGAGGCAGGGATTAGCTAAAGGCTTAGCCATAGGAAGCAACGGCGTCGTTTTTGCCATGTGGTCCTTCATGTCCTATTATGGTAGCCGCCTAGTCATGTACCACGGTGCTAAGGGCGGTACCGTTTTCGCCGTTGGAGCCTCCATCGCCGTCGGTGGCCTATCTTTAGGGTCGGCTTTATCGAACGTGAAGTATTTCTCGGAGGCGAGTACAGCAGGGGAGAGAATAATGGAAGTGATAAAGAGGGTTCCAAAGATTGACTCCGACAACATGAGTGGTGAGACCCTGGAGAGGGTAACAGGGGAAGTGGAATTCGAACACGTGCAATTCGCGTACCCGTCGAGGCCAGGGAGCATAATACTGAATGATTTTAGTCTGAGGATTCCAGCAGGGAGGACGGTGGCATTAGTGGGAGGGAGTGGATCAGGGAAATCAACAGTGATATCACTTTTGCAGAGATTTTATGACCCACTTGAGGGAGAGATACGGCTTGATGGTGTGGGCATTCACAGGATGCAGCTTAAGTGGCTAAGGTCACAGATGGGTCTGGTCAGTCAAGAACCTGCCCTCTTTGCCACGAGCATCAAGGAGAACGTTCTCTTTGGAAAGGAAGATGCTTCCATGGAAGAGGTCATTCTTGCTGCCAAAGCTTCTAATGCCCATAATTTCATCTCACACCTCCCTCTTGGCTATGATACTCAGGTTGGTGAAAGAGGAATTCAAATGTCAGGGGGCCAAAAACAGAGAATAGCCATAGCAAGAGCAATAATAAAGAAACCAAGATTGCTTCTACTAGATGAAGCAACCAGTGCATTAGATTCTGAGTCAGAACGAGTTGTTCAAGAAGCTCTAGACAAAGCAGCAGTGGGTCGCACCACAATAATCATAGCCCACCGTTTATCCACCATCCGAAACGCAGATGTAATCGCCGTCGTCCAGAATGGTAAGATCATGGAAATGGGTTCCCATGACGAGCTCATCCAAAACGACAATGGCCTTTACACATCTCTAGTTCGTCTTCAACAGACAGAACAGTTCAAGACCCAACATGAAGATAATGTCTCTGCCCTTTCGTCTATATCAAACAGAGACATGAACAATACTAGTAGCCGTAGGCTTTCTTTGGTTAGTCGTTCTAGCTCTGCTAATTCAATAGCGAGAAATCCAGCTTCGGTTGCTGATGAAGAAGATGGTCATGTCAAAGAAGATCAGAAATTGCCTGTTCCTTCGTTTAGGAGATTGTTGGCTCTGAATCTTCCTGAATGGAAGCAGGCAACTATGGGGTGTATAAGTGCTGCTCTGTTTGGTGCGGTTCAGCCATTGTATGCATTTGCAATGGGGTCGATGATATCTGTGTATTTCTTGACGGATCATGATGAGATTAAAAGGAAGACCAGGATTTATGCTCTCTGCTTCGTGGGGTTGGCTATCTTCTCTTTACTCATTAATATAAGCCAGCATTATTATTTTGCTTATATGGGAGAGTACCTTACCAAAAGGGTTAGAGAGAGAATGCTCTCCAAGATCCTCACTTTTGAAGTCGGATGGTTCGATCAGGACGAAAATTCCAGTGGTGCTATTTGCTCTCGACTTGCCAAAGATGCCAATGTGGTGAGGTCTTTGGTGGGGGATAGGATGGCTCTACTAGTACAAACATGTTCAGCAGTGACATTAGCCTGCACAATGGGGTTGGTCATTTCATGGAGGCTAGCCCTTGTTATGATAGCCATTCAGCCTCTCATCATTACTTGCTTCTACACAAGGCGAGTCCTTCTCAAAAGCATGTCTAGCAAAGCCATAAAAGCCCAAGAGGAAAGCAGCAAGTTAGCTGCAGAAGCTGTGTCAAATCTAAGAACTGTTACTGCCTTCTCTTCACAAGATCGAATATTGAAAATGCTCGAGAAAGCCCAAGAAGGCCCAAGCAAAGAGAGTATCCGTCAGTCCTGGTACGCAGGAATAGGCTTGGGCTGTTCCCAAGGCATCATGTCATGTACTTGGCCCTTAGACTTTTGGTATGGTGGCAAGCTTATCTCCCGAGGTTACATAAACTCAAAGGCAATGTTCGAAACCTTCATGATCTTGGTCAGCACGGGCCGGGTCATCGCGGACGCCGGAAGCATGACCTCGGATCTCGCCAAGGGCGCCGACTCAGTTGGCTCTGTTTTCTCCATCCTTGACAAATACACCAAGATCGAGCCCGAAGACCCAGACGGGCTCACACCCGAGAAAATAATGGGCCACATCGAGCTCCGGGACGTCCACTTTGCATACCCGGCCCGGCCTGATGTGACCTTATTCGAAGGGTTCTCACTAAAAATCGACACAGGGAAATCAACAGCACTAGTGGGCCAAAGCGGTTCAGGAAAATCCACCATAATTGGGCTTATAGAGAGATTCTACGATCCGCAAAAAGGAACAGTAACCATCGATGGAAAAGACATACGTTCATATCAACTCAGATCACTGAGAAAACACATAGCATTGGTGAGTCAAGAGCCAACACTGTTCAGTGGGACCATAAGAGAGAACATCGCATATGGATCGTCAGATAAGGTAACCGAATCGGAGATCGTAGAGGCGGCGAGAGCAGCGAACGCTCACGATTTCATTGGGAGCTTAAAGGACGGCTACGATACGTCATGTGGGGACAGGGGAGTGCAGTTATCGGGAGGGCAAAAGCAGAGGATTGCGATAGCGAGGGCGATATTGAAGAATCCAACGGTGTTGCTGTTAGATGAGGCAACGAGCGCGTTAGATAGCCAATCAGAGAAGGTGGTGCAAGAAGCATTGGAGAGAGTAATGGTGGGAAGGACAAGTGTGGTGGTGGCCCACAGGTTAAGTACTATACAGAATTGTGATATGATTGCGGTTTTGGATAAAGGGAAAGTGGTGGAGAAAGGGACACATTCGTCTTTGTTGGGTAAAGGACCCTCCGGAGCTTATCATTCTCTTGTGAATATTCAAAGAACACCGCAAATTTAA | 3777 | 0.4731 | MDGDQELSVGASSSSSSPSKKKKNGSIIPSIFMHADRYDWFLMVLGVIGSLGDGFNTPLVLLLSSRLMNNIGSSSITDPNSFTHNINKNAVKLLYVAASSFIACFLEGYCWTRTGERQAARMRARYLKAVLRQDVTYFDLHVTSTSEVITSVSNDSLVIQDAIAEKVPNFLVNVFMFIGSYVAAFAMLWRLAIVGFPFVLLLVIPGLLYGRTLMGLARKMREEYNQAGTIAEQAISSIRTVYSFVGESKTIASFSDALQGSVRLGLRQGLAKGLAIGSNGVVFAMWSFMSYYGSRLVMYHGAKGGTVFAVGASIAVGGLSLGSALSNVKYFSEASTAGERIMEVIKRVPKIDSDNMSGETLERVTGEVEFEHVQFAYPSRPGSIILNDFSLRIPAGRTVALVGGSGSGKSTVISLLQRFYDPLEGEIRLDGVGIHRMQLKWLRSQMGLVSQEPALFATSIKENVLFGKEDASMEEVILAAKASNAHNFISHLPLGYDTQVGERGIQMSGGQKQRIAIARAIIKKPRLLLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIRNADVIAVVQNGKIMEMGSHDELIQNDNGLYTSLVRLQQTEQFKTQHEDNVSALSSISNRDMNNTSSRRLSLVSRSSSANSIARNPASVADEEDGHVKEDQKLPVPSFRRLLALNLPEWKQATMGCISAALFGAVQPLYAFAMGSMISVYFLTDHDEIKRKTRIYALCFVGLAIFSLLINISQHYYFAYMGEYLTKRVRERMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRMALLVQTCSAVTLACTMGLVISWRLALVMIAIQPLIITCFYTRRVLLKSMSSKAIKAQEESSKLAAEAVSNLRTVTAFSSQDRILKMLEKAQEGPSKESIRQSWYAGIGLGCSQGIMSCTWPLDFWYGGKLISRGYINSKAMFETFMILVSTGRVIADAGSMTSDLAKGADSVGSVFSILDKYTKIEPEDPDGLTPEKIMGHIELRDVHFAYPARPDVTLFEGFSLKIDTGKSTALVGQSGSGKSTIIGLIERFYDPQKGTVTIDGKDIRSYQLRSLRKHIALVSQEPTLFSGTIRENIAYGSSDKVTESEIVEAARAANAHDFIGSLKDGYDTSCGDRGVQLSGGQKQRIAIARAILKNPTVLLLDEATSALDSQSEKVVQEALERVMVGRTSVVVAHRLSTIQNCDMIAVLDKGKVVEKGTHSSLLGKGPSGAYHSLVNIQRTPQI | 1258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi02g1826 | 1258 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 360 | 606 | IPR027417 | - | |
Mibi02g1826 | 1258 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1013 | 1250 | IPR003439 | GO:0005524 | |
Mibi02g1826 | 1258 | ProSitePatterns | ABC transporters family signature. | 1153 | 1167 | IPR017871 | GO:0005524|GO:0016887 | |
Mibi02g1826 | 1258 | Pfam | ABC transporter transmembrane region | 44 | 310 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mibi02g1826 | 1258 | Pfam | ABC transporter transmembrane region | 692 | 961 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mibi02g1826 | 1258 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Mibi02g1826 | 1258 | CDD | ABC_MTABC3_MDL1_MDL2 | 1013 | 1253 | - | - | |
Mibi02g1826 | 1258 | Pfam | ABC transporter | 1033 | 1181 | IPR003439 | GO:0005524 | |
Mibi02g1826 | 1258 | MobiDBLite | consensus disorder prediction | 7 | 24 | - | - | |
Mibi02g1826 | 1258 | Pfam | ABC transporter | 386 | 535 | IPR003439 | GO:0005524 | |
Mibi02g1826 | 1258 | FunFam | ABC transporter B family member 1 | 30 | 367 | - | - | |
Mibi02g1826 | 1258 | SUPERFAMILY | ABC transporter transmembrane region | 32 | 352 | IPR036640 | GO:0005524|GO:0016020 | |
Mibi02g1826 | 1258 | CDD | ABC_MTABC3_MDL1_MDL2 | 368 | 606 | - | - | |
Mibi02g1826 | 1258 | Gene3D | - | 358 | 607 | IPR027417 | - | |
Mibi02g1826 | 1258 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 44 | 333 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mibi02g1826 | 1258 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 693 | 978 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Mibi02g1826 | 1258 | FunFam | ABC transporter B family member 4 | 358 | 614 | - | - | |
Mibi02g1826 | 1258 | ProSitePatterns | ABC transporters family signature. | 507 | 521 | IPR017871 | GO:0005524|GO:0016887 | |
Mibi02g1826 | 1258 | SUPERFAMILY | ABC transporter transmembrane region | 672 | 998 | IPR036640 | GO:0005524|GO:0016020 | |
Mibi02g1826 | 1258 | Gene3D | - | 1003 | 1257 | IPR027417 | - | |
Mibi02g1826 | 1258 | FunFam | ABC transporter B family member 4 | 1003 | 1257 | - | - | |
Mibi02g1826 | 1258 | PANTHER | ABC TRANSPORTER B FAMILY | 14 | 749 | - | - | |
Mibi02g1826 | 1258 | Gene3D | ABC transporter type 1, transmembrane domain | 31 | 982 | IPR036640 | GO:0005524|GO:0016020 | |
Mibi02g1826 | 1258 | SMART | AAA_5 | 395 | 581 | IPR003593 | - | |
Mibi02g1826 | 1258 | SMART | AAA_5 | 1040 | 1233 | IPR003593 | - | |
Mibi02g1826 | 1258 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1002 | 1253 | IPR027417 | - | |
Mibi02g1826 | 1258 | FunFam | Putative ABC transporter B family member 8 | 656 | 1001 | - | - | |
Mibi02g1826 | 1258 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 368 | 604 | IPR003439 | GO:0005524 | |
Mibi02g1826 | 1258 | MobiDBLite | consensus disorder prediction | 644 | 666 | - | - | |
Mibi02g1826 | 1258 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 680 | 996 | - | - | |
Mibi02g1826 | 1258 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 43 | 341 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi02g1826 | Mibi-ChrMibi02 | 18959235 | 18966002 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi02g1826 | 18 | 1254 | Calmodulin-binding Proteins | AT2G36910 | 44.533 | 0.0 | 1071 |