Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1819 ATGGTCAATCGCATGACCATGGAGGAGGGGGACATGAACCAAACAGAAAAATATGATAGGTTCATGGAGTTCTTGATGGATTTCAACGCTCGAAGGATAGGCCCTACTGGACTCATAGAAAAGGTGAAGGAACTATTCAAAGGGCATAGGGATTTGATTTCTGGATTAAATGCCTTCATGCCCCAAGGCTATGAGATAACGCTTGATGAGTGTGAAGCTAGCCCTCCAAAGACAGCGGTTACGTTTGAAGAGACTATAGATTTTGTAAACAAGATCAAGGAACGATTTCAAAATGATGATCATGTATACCGATCATTCTTGAACATTTTGAAGTTGTGCCGCACTGGTAGCAAGGATATTACTGAGGCCTATATGGAGGCTCCCAATATGGAGATTCATTGGACTAAGAGTCGAAAGGAATGGAATGAAAGGAAAAAACGCTACTCAAAGATGGATAATGGACCTCAAACTGCTTCTTTTGAAAAGTTGATAAATGGATTTACATTGTTGAGTAAAGATCACAAAGGCATGATAAGTATTCTACAGAAAGGATAG 555 0.4 MVNRMTMEEGDMNQTEKYDRFMEFLMDFNARRIGPTGLIEKVKELFKGHRDLISGLNAFMPQGYEITLDECEASPPKTAVTFEETIDFVNKIKERFQNDDHVYRSFLNILKLCRTGSKDITEAYMEAPNMEIHWTKSRKEWNERKKRYSKMDNGPQTASFEKLINGFTLLSKDHKGMISILQKG 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1819 184 Gene3D Paired amphipathic helix 8 61 IPR036600 GO:0006355
Mibi02g1819 184 SUPERFAMILY PAH2 domain 12 64 IPR036600 GO:0006355
Mibi02g1819 184 SUPERFAMILY PAH2 domain 75 126 IPR036600 GO:0006355
Mibi02g1819 184 ProSiteProfiles PAH domain profile. 1 63 IPR003822 GO:0006355
Mibi02g1819 184 PANTHER SIN3B-RELATED 12 126 IPR039774 GO:0003714
Mibi02g1819 184 Pfam Paired amphipathic helix repeat 16 59 IPR003822 GO:0006355
Mibi02g1819 184 Gene3D Paired amphipathic helix 77 179 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1819 Mibi-ChrMibi02 18875336 18876258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1819 15 97 WRKY Transcription Factor Family AT4G12020 33.735 3.55e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi02g1819 PAH 3.2e-09 No_clan