Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1811 ATGTCAAACAACGTTTCAGGCGATGAAGGAAGCTTCTCGTCCGGAAACACGGGAGAAGTTGAAGTTCATGAAGAAGTAGTGAAGGAAAATAATCCGAACGCGGAGATCGTTGCGTTGTCGCCGACGACGCTGATGGCGACGAACAGGTTTGTGTGTGAGATATGCAACAAGGGGTTTCAGAGGGACCAGAACCTGCAGCTGCACAGGAGAGGGCACAATCTGCCATGGAAGCTGAGGCAGAGGGCGAGCACAGAGGTGGTGAAGAAGAGGGTGTACGTGTGCCCTGAGCCCACATGTGTGCACCATAACCCTGCAAGAGCGCTCGGAGACCTCACTGGCATCAAGAAGCATTACAGCAGAAAGCATGGTGAGAAGAAGTGGAAGTGTGACAAGTGCTCCAAACGATATGCTGTTCAATCTGACTGGAAGGCCCACCATAAAACCTGTGGTACCCGCGAATACAAATGCGACTGTGGCACCATTTTCTCCAGGAGAGATAGCTTCATCACGCACAGGGCATTTTGTGACGCTTTAGCTGAAGAAAACAACAGAGTGAACCAGGGAATAGGATTAAGCTGTGGCTTGCAAAATCAGGTGTCCGATTTTATGCCCACCTTGCCCCTCACCACCACCTCCTCCGACTTCAACCACCCTCTCAGGTCCCTCTCCCATGACCTCAGCCCAAACCCATTCAAGCCCATCACCATGCCTGGTGGGCCCATGTTCTCCACAACATCCCCTTCCCTCTTCACCAGCCCAAAGCCCATCTCTCCCTCCTCCTACTTCCCAGCCGACACCAAAAACATGGGCCCGAGCCCAATGTTTTCTGGGTCGGCCCAAATGTCCGCAACTGCTTTGCTTCAGAAAGCGGCCCAAATGGGTGCTACCGCAAGTAACAACAGCATCAACTCACCCATGATGCAACAAAAGAACTTGGTCACAAGCACTATGGCTGGTCCTGATGATCATCATAATGTCCCTTCCATTATTAATAAACCACCATTTTCTGCTTCTGACCCTTCCTCTTATGACCAATCCAACATGGCTGGGATTAATGGTGGTGGACCATTCACCAATCAAATGTTTCAAAATAATAAAGTCCCGCAAGAAATTTCAGAACTTTTTTATCCTACTAGTGCTGCTAATGGACCTGCAATTAGTGATATTGGTATGTTCAGTCAGATTTTCATTGCTAGTGATCAGAATTCAGGATTGATGATGAAGAACAATGCGGAACGAGAGAATAACAACATTAGTAGTGGTACTAGTTCAAGTTTGATGATGCAGGGGAGAGATAATGTGAGGGAAGAGAATCCGATGGGGCCAAATAATATGGCAAGGATTCATGATTTCTTGGGTGTTGGAGGTGAGGGTTCGGGGAATTTTCATGATCCAGATCATCAACATCAGCAACAAAGGTTGGAGTTAGAAGTGATGAATAATAATAACCAGAGAGTATCATCATCAGTTATGAATCATCATCACTTTAATCATCAACATCATAGTCTTCCTCGTGGGGATTCACCTATGGATAAAACCATTTGGGATGTTTGA 1554 0.4717 MSNNVSGDEGSFSSGNTGEVEVHEEVVKENNPNAEIVALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRASTEVVKKRVYVCPEPTCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHHKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNRVNQGIGLSCGLQNQVSDFMPTLPLTTTSSDFNHPLRSLSHDLSPNPFKPITMPGGPMFSTTSPSLFTSPKPISPSSYFPADTKNMGPSPMFSGSAQMSATALLQKAAQMGATASNNSINSPMMQQKNLVTSTMAGPDDHHNVPSIINKPPFSASDPSSYDQSNMAGINGGGPFTNQMFQNNKVPQEISELFYPTSAANGPAISDIGMFSQIFIASDQNSGLMMKNNAERENNNISSGTSSSLMMQGRDNVREENPMGPNNMARIHDFLGVGGEGSGNFHDPDHQHQQQRLELEVMNNNNQRVSSSVMNHHHFNHQHHSLPRGDSPMDKTIWDV 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1811 517 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 25 477 IPR031140 -
Mibi02g1811 517 SMART c2h2final6 50 72 IPR013087 -
Mibi02g1811 517 SMART c2h2final6 92 122 IPR013087 -
Mibi02g1811 517 SMART c2h2final6 127 147 IPR013087 -
Mibi02g1811 517 MobiDBLite consensus disorder prediction 497 517 - -
Mibi02g1811 517 MobiDBLite consensus disorder prediction 1 23 - -
Mibi02g1811 517 MobiDBLite consensus disorder prediction 1 18 - -
Mibi02g1811 517 Gene3D Classic Zinc Finger 28 96 - -
Mibi02g1811 517 FunFam protein indeterminate-domain 12-like 29 98 - -
Mibi02g1811 517 FunFam protein indeterminate-domain 5, chloroplastic-like 105 184 - -
Mibi02g1811 517 ProSiteProfiles Zinc finger C2H2 type domain profile. 50 72 IPR013087 -
Mibi02g1811 517 ProSitePatterns Zinc finger C2H2 type domain signature. 52 72 IPR013087 -
Mibi02g1811 517 Gene3D Classic Zinc Finger 106 185 - -
Mibi02g1811 517 SUPERFAMILY beta-beta-alpha zinc fingers 49 147 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1811 Mibi-ChrMibi02 18800026 18803112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1811 1 319 IDZ Gene Family AT1G55110 51.130 4.11e-103 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi02g1811 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1811 02 18800026 18803112 Mibi02g1811 02 18800026 18803112 ECH