Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1808 ATGGTGGGAAGGAGGAAACCTCTGGTACTCGTTTCCACCAAATCGCTCGTCAATTCTGTGCTCAGATCGTCACAAGGCTTGGAATCAAAACCTGAAGCTGGAGACAACTTCTTCGATAACGGCTCTCCCGAGAAATTCCAGGTGCCTGTGGGAATTCTCCGATTCTCGGAGGATGGAAACGAAAGACCAGAATCTCAATTGGCTGCTCTTGACGATTCTGCTTTGGTCGGCTTATCAACTTCGCTTTTGAGAAGGCTTTGTATAACTTCGGGTTCATTGGTGCTTGTTAAGAACCGTGAGATGAACACACAGAGAATTGCTCAGGCAGTTGCCCTAGATCCTCCTGGAAGTGATGAGTGCACATCTGATGTTAAATTGCCCTCTCCACATATAATGGTTGTATTTCCCTCTTATGCTTTCCCTTATGGTGGCACGTTAGATCATAAAGTCGCTTATATATCTCCTCTCTTAGCTTTCAACCTCAATTTTCACATAACATGCTTAGAATCCATTCTACACCAAGGGGAAGAGGTATTAACATCTTATTTCAATCCAAAAGCGGATGTGGAGGCTTCTGCAACAAGCTCTGAGACTTCTGTCATTGGTATAGAATTGGAACCTTTGGTTCAAGCTCCTAGGTATGCATTGCATCTTATGGTTTCTTTTGTGAAGATACCAAAGTGTGGTACCCTTGAAACGCTCAGAGGAAGTTCACCCATTGAATCAGAAGACCGCCAAAATATGATTGATGTAGCATTGCAAAAATATTTTCAAGTGGATAGATATTTGGCAAAAGGAGATATTTTTGGCATCAGCATAAATTGGAACTGCAATTCCATTGCATGTATTCCTTGCAATCGAAAATCAAAAAAGAAAAATGAAAATCTTATCTATTTCAAGGTCATTGCTATGGAACCAGCAGATGATCCAATTCTTCGTGTCAATCAAGCCTCAACTGCTCTGGTTCTCGGAGGGAGCATCTCTTCTGCTCTTCCACCAGATTTGTTAATTGCTGGACCAGAAGAACCTGTGCCTTTACAAGGGGACATAGTAGAAGTTTTGGGTTCAGTACTTACACCGGCGTTCTGTCCATCAGCACTTTCTTTAAAGTTCAGAGTTTCAGTTCTATTGTATGGCTTAGAAGGTTGCGGGAAGCGGACTGCTGTAAGATATGTTGCTCGTCGGTTGGGCATGCATGTGGTGGAATATAGTTGTCATGATTTAACAGTTTCAGATAGGAACACATCTGCAGCACTAGTTGAAGCTTTCAAGACAGCTCAAAGATACTCACCAACTATACTTCTTCTCCGTCATTTTGAAGTTTTTCGAGACATGCAAGCTCTTGAGGGTCCAGTAAATGATCAAAGAGGCAATACATCTGAAATTGCATCAATTATTAAAAAATTCACAGATCCAACACATAAGGATGGTGGCAGATCCTCCCAAGAGAAACCAAATGGTGAATTAGTTGATAAGAGTGCTGAAAATACAAGTGGGCATCCGATATTGTTAATTGCAGCTGCTGTTAGTTCAGAAGGTCTGCCTTCAACTATCAGACGCTGCTTCAGCCATGAAATAAAAGTGGGGCCTTTAACTGAAGAGCAAAGGGCTGAAATGTTATCCAAGACATTGCAAAGTGTCCTCTCTAACACTGATGCTGAGAGTTTTGTAAAAGAAATAGTTGGGCAGACATCTGGTTTCACGGCCAGAGACATGTGTGCTTTGATTGCTGATGTTGGTGCCAACTTATTTCCCAGGTGTTCTGATGCTATAGATAAAGCTAGGCCTAAGGATATTGATGGTTCTTGTAGTTCGGAAGTCATGCAGGACTGCAATCACTGGAAAGTTTCACCAGAGGTTCCAGTCAAAGAACCATTGGCAAAAGCTTTGGAACGATCAAAGAAAAGAAATGCTGCTGCATTGGGTGCTCCAAAGGTTCCGGATGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTGAAAAAATCAATACTGGATACTATTCAGTTGCCTCTCCTGCATAAGGATCTGTTTTCATCAGGATTACGTAAGCGGTCTGGTGTTCTTCTGTATGGTCCTCCAGGAACTGGCAAAACATTATTAGCCAAAGCTGTTGCCACCGAATGTTCCTTAAATTTTCTAAGTGTAAAAGGGCCTGAACTGATCAACATGTACATTGGAGAGTCTGAGAAGAATGTGCGAGACATTTTCCAGAAGGCCAGATCATCACGACCATGTGTTATCTTCTTTGATGAGCTTGATTCTCTTGCTCCAGCCCGGGGTGCTTCTGGGGATTCTGGGGGTGTTATGGATAGAGTGGTTTCTCAGATGCTGGCAGAGATTGATGGCCTGAATGATTCTGCACAGGATCTCTTTATTATAGGTGCAAGTAACAGGCCGGACTTGATTGACCCTGCACTTTTACGCCCAGGGAGATTTGATAAACTGCTGTATGTAGGGGTTAACACTGATGCATCTTACAGAGAGAGGGTCCTTAAAGCACTTACGAGAAAGTTTAAATTGTCTGAAGATGTGTCGCTTTACTCGATAGCTAAAAAGTGTCCACCAAACTTTACTGGTGCAGACATGTATGCCTTGTGTGCAGATGCATGGTTTCAGGCTGCAAAACGCAAGGTTTTGAGTGCAGATCCAGAGTCTTCCAGTAAAGATGATGAAGCAGACTCTGTTGTTGTTGAATACAGTGATTTTGTCCAGGTCTTGGTTGAGCTGACGCCTTCTCTATCCATGGCCGAGCTTAAAAAGTACGAGCAACTGAGAGATCAGTTTGAAGGCACATCAAAATGA 2805 0.4278 MVGRRKPLVLVSTKSLVNSVLRSSQGLESKPEAGDNFFDNGSPEKFQVPVGILRFSEDGNERPESQLAALDDSALVGLSTSLLRRLCITSGSLVLVKNREMNTQRIAQAVALDPPGSDECTSDVKLPSPHIMVVFPSYAFPYGGTLDHKVAYISPLLAFNLNFHITCLESILHQGEEVLTSYFNPKADVEASATSSETSVIGIELEPLVQAPRYALHLMVSFVKIPKCGTLETLRGSSPIESEDRQNMIDVALQKYFQVDRYLAKGDIFGISINWNCNSIACIPCNRKSKKKNENLIYFKVIAMEPADDPILRVNQASTALVLGGSISSALPPDLLIAGPEEPVPLQGDIVEVLGSVLTPAFCPSALSLKFRVSVLLYGLEGCGKRTAVRYVARRLGMHVVEYSCHDLTVSDRNTSAALVEAFKTAQRYSPTILLLRHFEVFRDMQALEGPVNDQRGNTSEIASIIKKFTDPTHKDGGRSSQEKPNGELVDKSAENTSGHPILLIAAAVSSEGLPSTIRRCFSHEIKVGPLTEEQRAEMLSKTLQSVLSNTDAESFVKEIVGQTSGFTARDMCALIADVGANLFPRCSDAIDKARPKDIDGSCSSEVMQDCNHWKVSPEVPVKEPLAKALERSKKRNAAALGAPKVPDVKWEDVGGLEDVKKSILDTIQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSSRPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSAQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNTDASYRERVLKALTRKFKLSEDVSLYSIAKKCPPNFTGADMYALCADAWFQAAKRKVLSADPESSSKDDEADSVVVEYSDFVQVLVELTPSLSMAELKKYEQLRDQFEGTSK 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1808 934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 647 928 IPR027417 -
Mibi02g1808 934 CDD AAA 365 436 - -
Mibi02g1808 934 FunFam Peroxisomal biogenesis factor 6 646 835 - -
Mibi02g1808 934 MobiDBLite consensus disorder prediction 470 494 - -
Mibi02g1808 934 Gene3D - 349 551 IPR027417 -
Mibi02g1808 934 SMART AAA_5 684 823 IPR003593 -
Mibi02g1808 934 SMART AAA_5 371 532 IPR003593 -
Mibi02g1808 934 Pfam ATPase family associated with various cellular activities (AAA) 375 529 IPR003959 GO:0005524|GO:0016887
Mibi02g1808 934 Pfam ATPase family associated with various cellular activities (AAA) 688 820 IPR003959 GO:0005524|GO:0016887
Mibi02g1808 934 Gene3D - 822 908 - -
Mibi02g1808 934 ProSitePatterns AAA-protein family signature. 791 809 IPR003960 GO:0005524|GO:0016887
Mibi02g1808 934 CDD AAA 682 820 - -
Mibi02g1808 934 FunFam Peroxisome biogenesis protein 6 344 529 - -
Mibi02g1808 934 PANTHER AAA-FAMILY ATPASE 69 931 - -
Mibi02g1808 934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 590 IPR027417 -
Mibi02g1808 934 Gene3D - 646 923 IPR027417 -
Mibi02g1808 934 FunFam Peroxisome biogenesis protein 6 822 908 - -
Mibi02g1808 934 MobiDBLite consensus disorder prediction 470 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1808 Mibi-ChrMibi02 18775190 18781524 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1808 654 890 Calmodulin-binding Proteins AT3G56690 38.655 1.84e-39 156