Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1796 ATGCTCCAAACAAAAGACTCTTTGCTTGGCAAAGGTCAAGTGAGGAGAGAAGTATGGAAAAATGGTGCAGCCATCTTTCCCCAACCCCATTTCGTCTTCAACATCATAAATCTAAACCCTTGTCTCATTTTCCGACCATCGGAAACTATGACTGATTCTCCGAAGAAAGATCAAGCGCCGAAGGCCCAAAGGCCATGCGACTATTGTGGCGATTCCACTGGTATTCTCTACTGTCGAGCTGACTCTGCGAAGCTATGTTTCTCTTGTGATCGTGAAGTTCACTCTACCAACCAACTCTTCTCGAAGCACACACGAGCTCTTCTCTGTGATGCCTGCGATGATTCGCCCGCCACAATACTCTGTTCTACAGAAAGCTCCGTTTTTTGCCAGAATTGTGATTGGGAAAGGCACAATCTTTCGCTGTCTATGGTTCATGATAGGAGGCCACTTGAGGGATTTACTGGGTGTCCTTCTGTGACTGAGTTGTTAGCGATTCTGGGTTTTGAAGATTTGGGGAAGAAAGCTTTGTTTTCGAGCGAGGATTGTGGAGGATGTGGCGTTGATGGTGGTGGTGATGGGTTAGTGGGATCTGAGCTTGAAGATGGACTTTCGGATTTGTTGGTATGGGATGCTCCTGCTGTTGTTAGCCTTGACGATTTGATTACTTCTACAAGCTCCTCTCACAATTATCAGGCCATGGAGGTTCCTCCTCTGCCTAAGAACCGTAAGGCTGCTTGTGGGCAACACAAGGAAGAAATCATTAGTCAGCTTCGTGAGCTAGCACAGTCGGAGCCCGGCTTGAATTTTGGAGATGTAGATACTGAACGACTGAGCTCCAGGCATCAAATAGTCCCTGAACAGTATTTACAGTCGGCGAGCTTATCCACGGGTTTTGAACATGAATTCGAGGCTGATATTTTTCGTCCTTGTGAGGCAAGTGTTTTTGAGGGGCCTAGAGATAGTGAGACTGCAAATCAAGTTGTTCCTCCTGATCTATCGTTGCATAAAGAGGAAGTTCCTGACATATATTCAGCGTCCCCAGTCTATGGGAATCATACCTCTCTTAACAATGGTGGACGACTGCCAAATAACTCTGAAAACTTATCGACCACTCCGAAAGTTGCTACATGTGAGCTGTCAAGTCAAGAAAGAGACTCTGCATTATTACGTTACAAGGAGAAGAAGAAAACAAGAAGATATGATAAGCACATAAGGTATGAATCACGGAAAGTTCGGGCAGAAAGCAGGACAAGAATCAAAGGTCGTTTTGCCAAGATAGAACACTGA 1287 0.4545 MLQTKDSLLGKGQVRREVWKNGAAIFPQPHFVFNIINLNPCLIFRPSETMTDSPKKDQAPKAQRPCDYCGDSTGILYCRADSAKLCFSCDREVHSTNQLFSKHTRALLCDACDDSPATILCSTESSVFCQNCDWERHNLSLSMVHDRRPLEGFTGCPSVTELLAILGFEDLGKKALFSSEDCGGCGVDGGGDGLVGSELEDGLSDLLVWDAPAVVSLDDLITSTSSSHNYQAMEVPPLPKNRKAACGQHKEEIISQLRELAQSEPGLNFGDVDTERLSSRHQIVPEQYLQSASLSTGFEHEFEADIFRPCEASVFEGPRDSETANQVVPPDLSLHKEEVPDIYSASPVYGNHTSLNNGGRLPNNSENLSTTPKVATCELSSQERDSALLRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAKIEH 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1796 428 Pfam CCT motif 384 425 IPR010402 GO:0005515
Mibi02g1796 428 ProSiteProfiles Zinc finger B-box type profile. 104 150 IPR000315 GO:0008270
Mibi02g1796 428 SMART bboxneu5 61 108 IPR000315 GO:0008270
Mibi02g1796 428 SMART bboxneu5 109 150 IPR000315 GO:0008270
Mibi02g1796 428 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 65 425 - -
Mibi02g1796 428 CDD Bbox1_BBX-like 65 108 - -
Mibi02g1796 428 Pfam B-box zinc finger 107 149 IPR000315 GO:0008270
Mibi02g1796 428 ProSiteProfiles Zinc finger B-box type profile. 61 108 IPR000315 GO:0008270
Mibi02g1796 428 ProSiteProfiles CCT domain profile. 384 426 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1796 Mibi-ChrMibi02 18534978 18538867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1796 64 399 C2C2-CO-like Transcription Factor Family AT2G47890 41.228 3.35e-75 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mibi02g1796 CCT 1.8e-15 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1796 02 18534978 18538867 Mibi02g1796 02 18534978 18538867 ECH