Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1786 ATGAGTGCTATACCTTCTCCTCCTCCTCCTCCTGCGAGTGGCGACGGAACTCCGACGTTTAACTATGGCGGCCTCTCCGTCGAAGGTGAGAAAGATGTTTTGAATGATTCACTGTGGCAAGCGTGCGCCGGCGCTTCTGTCATTGTTCCTCGCACTGGCGACTTGGTCTTTTACTTTCCTCAAGGCCACTTGGAACAGGTTGCTGACTTTACTCGGCAGGATGGCTACATGGAACTCCCTGCTAGTGATTTGCCTTCTAAAATCCTTTGCAGGGTCATGGGTGCTCAACTAAAGGCTGAACCCAATACAGACGAGGTTTTCGCTCAAATTACTCTAATTCCTGAGTCAAAGCTAGATGAAGTTAGTTCAGATGATAAAGAGTCTCGACGAAAACCCAGAACTACTTCCAGGTGCTTTAGTAAGACGCTCACCCTATCAGATACAGGTGCACATGGTGGATTCTCCATTCCCAAGAAACTTGCCGAGGAATGCTTTCCACCTCTGGATATGTCTCAGCAACCACCAGGACAAGAGCTTGTGGCGAAGGACTTGCATGGTGTTATATGGACTTTTCGCCACACCTATCGGGGTCAGCCAAAACGACACCTGCTTACGGGAGGCTGGAGTTCATTCCTCCATTCAAAAAAGCTTGAACCCGGAGATACATGCACCTTTCTTTGCGGAGATAATGGAGAACTCGGCATTGGGATCCGTCGAGCACTTAAACAACACAACAAAGCATCCACATCCACATGCGTGATATCTGGCCATAGCATGCAACTCGGAATATTAGCTACTGCTTCTTATGCTGTTGCTACTGGATCCATGTTTACTGTATACTACCGTCCTTGGACTTGTCCTTCTGAATTCATTGTTCCATTGGGTCACTACATGAAGTCTAATAAAATGAAATATTCATGTGGAATGAAGATAAAAATGCAGTTTGAAGCCGAAGAATGTACAAGGAGACATGCAGGAACCATAATAGATATTGATGATATTGATGGCATGAGGTGGCCAAGTTCAGAATGGAGATGTCTCAAGGTGAAATGGGATGCCAAGCTAGATATAGATATGCGTCCTGAAAGGGTCTGTCCTTGGAACATTGAGCCCTTGGAATCTTCAGGGAAGAACGTTCCTAATCTGGCCCCACCAAAGCGGCCACGGTTACTTGGCCCATCAATGCCTGGAGTATTCTATCTTACCAAGGATGACATCGATCTGAACTCAGCCAACAATGCTTCTCAGAGATGTGAAAGGGACTTACAAGGTCAAGATTACAAAGATGCAGGCTTCCAACAAAATGACTCACAGTTCAGAACGACGAATCAACCGCACTTTGAACTGCAAATCCCTCCTTGCCATTCTCTTGGCGCCTCAGCATCATTTCCAGATGATGACATTTCAATTTCAAGCCCCCCCAAACAGCCCCCTATCCCAACCACTCATCATGACGCATGTAACAATGTCCCCGTCACCAAGTACCTTTCACTCTCAAATGTGAATTCCAACGATTCTGAATCCCGGGGATGGTGGGCATCTGAATCGAGGGAAGAGAATGACAGCAAAACTGAATACAAGCTTTTCGGGATAAGCTTAAAACACCCGGAGCTCCCTTCACCACAAGTTGCTGCTTCTAGCAGTACTTCAACCCTTCATGTTCCTCCAATGTCTCAGTCAAGCGTTTCTGCGACTATCCCAGTTTCTAAACCATCAAAGTGTATTTCAGGTGTTACATCGCAGAAAAAATGCAAGAAATGTAGCTCTGTTAATAGCAGGACTTGCACTAAGGTTCTTAAGCGTGGAAGTGCACTTGGTAGATCAGTTGACCTCTCGCGTATTGCTGGATACGAGGACCTCATTTCTGAACTGGATTTGATGTTTGATTTCAAAGGAAGCTTAATAAATGGAAGCAGCGGATGGCATGTTGTCCCCATGGATGATGACGGGGATATGATGCTGTTTGGAGATTTCCCGTGGCAGGATTTCCAGTCGATGGTGCAAAAGATGATCATTTGTCCAAAGGAGGACTCCTACAACCGGAGTGCTATTGTTAGCACAGCAGACTCGGCAAGCTTGTAA 2082 0.4621 MSAIPSPPPPPASGDGTPTFNYGGLSVEGEKDVLNDSLWQACAGASVIVPRTGDLVFYFPQGHLEQVADFTRQDGYMELPASDLPSKILCRVMGAQLKAEPNTDEVFAQITLIPESKLDEVSSDDKESRRKPRTTSRCFSKTLTLSDTGAHGGFSIPKKLAEECFPPLDMSQQPPGQELVAKDLHGVIWTFRHTYRGQPKRHLLTGGWSSFLHSKKLEPGDTCTFLCGDNGELGIGIRRALKQHNKASTSTCVISGHSMQLGILATASYAVATGSMFTVYYRPWTCPSEFIVPLGHYMKSNKMKYSCGMKIKMQFEAEECTRRHAGTIIDIDDIDGMRWPSSEWRCLKVKWDAKLDIDMRPERVCPWNIEPLESSGKNVPNLAPPKRPRLLGPSMPGVFYLTKDDIDLNSANNASQRCERDLQGQDYKDAGFQQNDSQFRTTNQPHFELQIPPCHSLGASASFPDDDISISSPPKQPPIPTTHHDACNNVPVTKYLSLSNVNSNDSESRGWWASESREENDSKTEYKLFGISLKHPELPSPQVAASSSTSTLHVPPMSQSSVSATIPVSKPSKCISGVTSQKKCKKCSSVNSRTCTKVLKRGSALGRSVDLSRIAGYEDLISELDLMFDFKGSLINGSSGWHVVPMDDDGDMMLFGDFPWQDFQSMVQKMIICPKEDSYNRSAIVSTADSASL 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1786 693 SMART B3_2 139 241 IPR003340 GO:0003677
Mibi02g1786 693 Gene3D - 588 681 - -
Mibi02g1786 693 Gene3D - 304 378 - -
Mibi02g1786 693 Pfam B3 DNA binding domain 139 239 IPR003340 GO:0003677
Mibi02g1786 693 ProSiteProfiles B3 DNA-binding domain profile. 139 241 IPR003340 GO:0003677
Mibi02g1786 693 CDD B3_DNA 137 239 IPR003340 GO:0003677
Mibi02g1786 693 MobiDBLite consensus disorder prediction 541 564 - -
Mibi02g1786 693 Gene3D - 137 241 IPR015300 -
Mibi02g1786 693 ProSiteProfiles PB1 domain profile. 593 675 IPR000270 GO:0005515
Mibi02g1786 693 MobiDBLite consensus disorder prediction 539 564 - -
Mibi02g1786 693 FunFam Auxin response factor 304 376 - -
Mibi02g1786 693 FunFam Auxin response factor 137 241 - -
Mibi02g1786 693 Pfam Auxin response factor 267 348 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mibi02g1786 693 SUPERFAMILY CAD & PB1 domains 592 669 - -
Mibi02g1786 693 SUPERFAMILY DNA-binding pseudobarrel domain 133 267 IPR015300 -
Mibi02g1786 693 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 32 678 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1786 Mibi-ChrMibi02 18427062 18432581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1786 32 677 B3 DNA Binding Superfamily AT4G23980 39.275 2.28e-132 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi02g1786 B3 1.6e-20 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1786 02 18427062 18432581 Mibi02g1786 02 18427062 18432581 ECH