Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1761 ATGTCCCTCTTCTTCTTCTTGTTGTTGCTCGTCCTTTTCTCTCTCCCCCTCCCTTCCCTCTCTGCAAACGACACCCTCCTGAACGCCCCCTGCCCTCTCAACTTCACAGTCCTCAACGTCGTCTCCGGCGGCGACCAACCCTCCCTCGACCCCTCCACCGTCTGCGACTTCTCCCGCTCCGCCATCCGCCTCCTCCAATCCGACTACCTCCGCCGCACCGGATTCTTCCTCCCCCCTCTCAACTCCTCCAACACCTGCTGGTCTAATTTCCAGAAATTCATCAACCAATACCGCCCCAACCTCGACGTTCGCTCCTCTTGTGGCTTCCAAACCACCTGGATCTCCCAAGGCTGCCAAAACATCACCACCAAAGGCGATTTCCTCTCCCTCTTCCCCTCCTCCTCCACTGTAATCCAAGATGTTAACAAAACTTGCAACCAGCCCCTTGAGAATAATTCCCCTTGTGCCCTTTGTACCACCAGCTTATCCTCTATGCAACCCAACATGAGTGGGAATTCCACTGGCAATATCTCTGGTTGTACGGCCTATCCCCCAATTTATGCCGCCGCCTTTGCCAATCAGGCTGGTCCGGCTGATAGAGGCACTGCACAGTGTATTTTCCTTCTGAGTTTTAATTCTACCGGTTCTAAAGGTAATAAACGAACTGTTGTTATTGTTGCTGTTGTGGTTGTTTGTGTTTTGGCTTTGTTGGCTGTGATTGTTGGGCTTTGGCTTCACCGGAGGTCGAAGATGAACGAGGGTACGATGGGGATTGGGAAAAGGGAGTTGGGTGTTGCCGTGTCTGGGTTGGATTCTATGAAGGAGAGTACCACTTTGATTAGGTTTACGTTTGATGACATCAAGAAGGCCACCAGGAACTTCTCTAGGGATAACATAATAGGTAGAGGTGGGTATGGGAATGTGTACAAAGGGTTCCTACCTGATGGGACTGAGGTTGCGTTGAAGAGGTTCAAGAATTGTTCTGCTTCAGGGGATGCCAGTTTCACTCATGAGGTTGAGGTCATTGCCAGCGTCAGGCATGTTAATTTGGTTGCTCTCAGGGGTTATTGTACGGCCACAACTAATCTAGAGGGTCACCAGAGGATTATAGTTTGTGATCTGGTCAAGAATGGGAGTCTTCATGATCATTTGTTTGATTCTGATGGAAAGAAACTCAGCTGGCCGGTTCGCCAACAGATTGCGCTGGGAACTGCTAGAGGGTTGGCTTATTTGCACTATGGAGCTCAACCTTCCATTATCCATAGGGATATTAAAGCGAGTAATATCCTTCTGGACGAGAAGTTTGAAGCTAAAGTTGCAGATTTTGGGCTTGCCAAGTTCAACCCTGAGGGGATGACTCATATGAGCACCAGGGTGGCTGGAACGATGGGGTATGTGGCGCCAGAGTATGCATTGTATGGGCAATTAACAGAGAGAAGTGATGTCTTCAGCTTTGGGGTTGTGCTTCTTGAGCTTCTGAGTGGGAAGAAGGCTCTCCAAATGAACGAGGATGGCCAACCTTCATCTTTGAGTGACTTGGCCTGGTCATTGGTTAGGGCAGGTAGAGCTTTGGATGTGATTGAAGATGGTATGCCGGAGCCGGGATCGCCAGAAGTGCTTGAGAAGTATGTGTTGATAGCCGTTCTTTGCTCTCACCCTCAGTTATACGCAAGGCCAACAATGGATCAGGTGGTGAAGATGTTGGAGACTGAGCAATCAGTGCCATCAATACCAGAACGGCCAATCCCTCTAGTTGCTGGAAGGATTGATATTGAGAGGTCCGCGGGTAGCTTTGGCGGCTCCGGCCAGCTCTCTAGTCCGACAGGTTATCGAACATTTGCATATGAAAGTGAATGCCATTCCTCTAATTCAAAGGAGGAGGAAGGAAGTTCGGACTCAAGAATACTGAGTACATAA 1917 0.4961 MSLFFFLLLLVLFSLPLPSLSANDTLLNAPCPLNFTVLNVVSGGDQPSLDPSTVCDFSRSAIRLLQSDYLRRTGFFLPPLNSSNTCWSNFQKFINQYRPNLDVRSSCGFQTTWISQGCQNITTKGDFLSLFPSSSTVIQDVNKTCNQPLENNSPCALCTTSLSSMQPNMSGNSTGNISGCTAYPPIYAAAFANQAGPADRGTAQCIFLLSFNSTGSKGNKRTVVIVAVVVVCVLALLAVIVGLWLHRRSKMNEGTMGIGKRELGVAVSGLDSMKESTTLIRFTFDDIKKATRNFSRDNIIGRGGYGNVYKGFLPDGTEVALKRFKNCSASGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVCDLVKNGSLHDHLFDSDGKKLSWPVRQQIALGTARGLAYLHYGAQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALQMNEDGQPSSLSDLAWSLVRAGRALDVIEDGMPEPGSPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMLETEQSVPSIPERPIPLVAGRIDIERSAGSFGGSGQLSSPTGYRTFAYESECHSSNSKEEEGSSDSRILST 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1761 638 SMART serkin_6 294 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1761 638 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 375 576 - -
Mibi02g1761 638 ProSiteProfiles Protein kinase domain profile. 294 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1761 638 SUPERFAMILY Protein kinase-like (PK-like) 272 569 IPR011009 -
Mibi02g1761 638 CDD STKc_IRAK 300 569 - -
Mibi02g1761 638 Gene3D Transferase(Phosphotransferase) domain 1 375 577 - -
Mibi02g1761 638 MobiDBLite consensus disorder prediction 616 638 - -
Mibi02g1761 638 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 75 633 - -
Mibi02g1761 638 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 260 373 - -
Mibi02g1761 638 Pfam Protein kinase domain 295 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi02g1761 638 Gene3D Phosphorylase Kinase; domain 1 265 373 - -
Mibi02g1761 638 Pfam SPARK 28 174 IPR043891 -
Mibi02g1761 638 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Mibi02g1761 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1761 Mibi-ChrMibi02 18104305 18106221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1761 28 624 Receptor kinase-like Gene Family AT2G48010 64.441 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Mibi02g1761 Pkinase 3.5e-42 CL0016