Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1733 ATGGCTGCTTCTTCTTCTTCGATCCTGTTTGACGGAAAGAGGACACGCAGAGATTTAAAAAGAAAGCTCCCACACGTGGACCGGTTGCAAGATCATGGATCTTATGATAGACTTCCTCCTGGTTGGTTGAACTGCCCAGCCTATGGTCAAGAAATAGGATGCATTATCCCTTCAAAGGTTCCGCTTGGTGAATCCTTTGATGATATCATTCCAAGTCAAAAATACTCTCCCAAGCAAGCAATTTTTCAACAAAGACATTTAGGTAGAGAAATTGGTCTAGTCATTGATTTAACAAATACTACTCGTTACTACCCAATATCAGATTGGACCAAAGAAAGAATTCGTCATGTCAAGATAAGATGCAGAGGAAGAGACTCTGTGCCTGATGATGAATCTGTAAACAGATTTTGCAATGAAGTCCTGGATTTTCTCTCCCAAAGAATAAACACAAACAAATATATACTTGTGCATTGCACTCATGGACACAACCGCACGGGTTATATGATTGTTCATTTTCTTGTTCGCAAAGAATCAATTTCAGTCACTGAGGCAATAAATAAATTTGCCACAGCACGTGACCCTGGAATTTACAAGCAGGATTATATCGATGCCTTGTACATGTTTTATCATGAAAGGAAGCCTGCAGAATTTGTTTGTCCTCAAACTCCAGAATGGAAGAGACTTTCTGATCCTGAGTTTCAATGTGCAGTTGACCCAGCTGTAGAAAATAATGGAGGGGTTCCTTTGAATGAGGATATCACAAGGAATGAAGTTTTGACAAATGATGATGTTTTGGGAGATCCTGTACCTTCAAATCAACTGCATTCAATGCGACTAGAGTGTTACCAGCTGCTTAAGTTGGGCAAAGGGGGAAAATCTTTGCAGTTTCCAGGATCGCATCCTGTTTCCCTCAACAGGGACAATCTAAAACTCTTAAGACAGAGGTATTACTATGCCACATGGAAAGCTGATGGGACACGGTATATGATGTTGATCATCTGGGATGGATGCTATTTGATTGATAGAAAATTTCATTTTCGAAAGGTCCATATGCGGTTTCCTTGCAGATATTTGAATGGGGGTACTCCTGAAAGGAATCACCACTACACGTTACTTGATGGCGAGATGATAATTGACATGGATCCGCATACACAAAAGCAGGAGAGAAGATACCTTATTTATGATCTGATAGCCATTAATCAAGTTTCTGTGACGGAGCTGCCTTTCTATGAACGTTGGAAATTGCTAGAGAAAGAAGTCATTGAGCCTCGTAACATGGAACGTGAGGCTCTTTGCAAGAGTGTAAATCCTTATTACCGATATGACCTGGAGCCATTTAGTGTGAGGAGGAAGGGTTTTTGGTTGCTTTCCACCGTTTCAAAGCTTCTGCATAACTTCATTCCACAACTGTCCCATCCATCAGATGGTCTTGTGTTCCAGGGCTGGGATGACCCTTACGTCCCTCGCACACATGAAGGTCTTCTGAAGTGGAAATACCCCGAAATGAACTCAGTTGATTTCCTCTTCGAGTTGGGAGGATCTGGTCGTTGCCTACTCTTTCTTCATGAACGTGGAAAGAAGAAGCTGATGGAAGGGAATAGGGTTACTTTCAAAGATGTATCAGATACATCTTCCTATTCAGGTAAAATCATTGAATGCTACTGGGATCCCGAGGAGAAACATTGGGTCTGTATGAGGATAAGGACTGACAAATCAACTCCAAATGAGATCAATACCTATAGAAAGGTAATGAGAAGCATAAAGGATAACATCACAGAAGAAGTTGTATTGAATGAGATAAATGAAATCATACGCCTTCCTTTGTATGCGGACAGAATAGGAAGGGATATAAAAGCTCACCAACAGATGGTCTCTGCAAGGCGAAGATGA 1890 0.4116 MAASSSSILFDGKRTRRDLKRKLPHVDRLQDHGSYDRLPPGWLNCPAYGQEIGCIIPSKVPLGESFDDIIPSQKYSPKQAIFQQRHLGREIGLVIDLTNTTRYYPISDWTKERIRHVKIRCRGRDSVPDDESVNRFCNEVLDFLSQRINTNKYILVHCTHGHNRTGYMIVHFLVRKESISVTEAINKFATARDPGIYKQDYIDALYMFYHERKPAEFVCPQTPEWKRLSDPEFQCAVDPAVENNGGVPLNEDITRNEVLTNDDVLGDPVPSNQLHSMRLECYQLLKLGKGGKSLQFPGSHPVSLNRDNLKLLRQRYYYATWKADGTRYMMLIIWDGCYLIDRKFHFRKVHMRFPCRYLNGGTPERNHHYTLLDGEMIIDMDPHTQKQERRYLIYDLIAINQVSVTELPFYERWKLLEKEVIEPRNMEREALCKSVNPYYRYDLEPFSVRRKGFWLLSTVSKLLHNFIPQLSHPSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFELGGSGRCLLFLHERGKKKLMEGNRVTFKDVSDTSSYSGKIIECYWDPEEKHWVCMRIRTDKSTPNEINTYRKVMRSIKDNITEEVVLNEINEIIRLPLYADRIGRDIKAHQQMVSARRR 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1733 629 FunFam mRNA capping enzyme, putative 260 496 - -
Mibi02g1733 629 CDD RNA_5'-triphosphatase 41 207 - -
Mibi02g1733 629 PIRSF mRNA_capping_HCE 26 629 IPR017074 GO:0004484|GO:0006370|GO:0140818
Mibi02g1733 629 SUPERFAMILY Nucleic acid-binding proteins 501 614 IPR012340 -
Mibi02g1733 629 ProSitePatterns Tyrosine specific protein phosphatases active site. 156 166 IPR016130 GO:0016311|GO:0016791
Mibi02g1733 629 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 134 203 IPR000387 GO:0016311|GO:0016791
Mibi02g1733 629 Gene3D DNA ligase/mRNA capping enzyme 260 496 - -
Mibi02g1733 629 FunFam mRNA capping enzyme family protein 497 606 - -
Mibi02g1733 629 PANTHER MRNA-CAPPING ENZYME 36 610 - -
Mibi02g1733 629 FunFam mRNA capping enzyme family protein 34 246 - -
Mibi02g1733 629 Pfam mRNA capping enzyme, catalytic domain 300 498 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mibi02g1733 629 SMART dsp_5 71 211 IPR020422 GO:0006470|GO:0008138
Mibi02g1733 629 Pfam Dual specificity phosphatase, catalytic domain 89 209 IPR000340 GO:0008138|GO:0016311
Mibi02g1733 629 Pfam mRNA capping enzyme, C-terminal domain 503 596 IPR013846 -
Mibi02g1733 629 Gene3D - 497 606 IPR012340 -
Mibi02g1733 629 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 215 IPR020422 GO:0006470|GO:0008138
Mibi02g1733 629 CDD Adenylation_mRNA_capping 272 499 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mibi02g1733 629 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 290 499 - -
Mibi02g1733 629 Gene3D Protein tyrosine phosphatase superfamily 14 232 IPR029021 -
Mibi02g1733 629 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 38 226 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1733 Mibi-ChrMibi02 17783471 17790786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1733 34 629 Protein tyrosine phosphatase (PTP) family AT3G09100 62.603 0.0 757