Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1723 ATGGCGGCTCCTTGTGGAGTTCGAGTGGCCGTCGTGGGTGACCGTCGTACCGGAAAATCCAGTTTGATTGCTGCCATGGCTTCTGAATCCTTCCCCGATGCCGTCCCCACTGTCCTCCCTCCCACTCTCTTGCCTGATGACTGCTTCCCCGATCGCCTTCCTCTCACCATCATTGACACTCCTTCCAGCCTGGAAAAACGGGGGAAGCGCAATGAAGAACTGAAGCGAGCTGATGTTGTGGTTTTGACATATGCATGTGATGAACCGATGACCATTACTCGTCTTAGTACTTACTGGCTCCCTGAACTGAAGGGCTTGGAGGTCAAGGCACCTGTTGTTGTGGTTGGCTGCAAGCTAGATTTACAGGATGAGAATCAGCAAATAAACTTAGAGAATCTCATGAAGCAGCTCCTACAACAGTCTGGTCACATTGTGACCTGCTTGGAATGCTCTGCAGCTACATTGTATCAGGTCCCTGAAGTTTTTTATTTTGCTCAAAAAGCAGTACTGCATCCAGTGGATCCATTGTTTGATCATGAGAGGCAAGCTTTAACAGATAGATGTTTAAGGGCGCTGAGAAGAATTTTTGTTCTCTGTGACAGAGACATGGATGATGCCCTCAATGATGCAGAGCTAAATGGATTTCAGATTAGATGTTTTGACACGCCGTTGCAGCCATCTGAATTAAAGGAAGTCAGAACACTTATACAGCAACAAGCACCTGAGGGAACCAATCAGCGTGGTCTTACTTTTCCAGGCTTTGTTTATATCCATAATACATTCCTGAAGAAAGGGCGTCCTGAGACAATATGGACTGTTCTAAGAAGATTTGGATATAACAATGATTTAAAACTCCGAGATGATTTTCTCCCAGTTCCATCTAACTATGCATCTGATCAGAGCGTGGAGCTGACAAGTGAAGCCGTAGAATTTCTGAATGGTATCTTCCGATTGTTAGATACGGATAGAGACCGAGCCCTACAACCTGCAGAGCTTGATAAGCTATTTTCGACTGCCCCAGAAAGTCCGTGGAGTGATGATCCATATAAGGATGCTGTTGAGCGAACTGGTGCAGGCTATATGACTCTTGGTGGATTTCTGTCCCAGTGGGCTCTCATGACATTACTTGATCCACCATCTAGCCTGGCTAATTTGATTTACATTGGATATAGCGGCAATCCTGCCGCAGCACTCCGCGTTACTCATAGGAGATCGGTGGACCGTAAGAAACAAAAGGCAGAGAGAAATGTGTTCCAGTGCTATGTCTTTGGTTCTAAAAACGCTGGAAAATCTACTTTGCTATATTCATTTTTGAGAAGGCCTTTCTCTGACACATATACTCCGACAATGGTTGAGCAATATGCTGCGAATGTTGTTGAATTAATTGGGGGGACAAGAAAAACGCTTATCTTGCGGGAGATACCTGAGGATGAAGTCAAGAATTTTTTGTCAAATCGGGATTGTTTGGCAGCATCTGATGTTGCTGTTTTTGTATATGATGGTTCAGATGAAATTTCGTGGAAAAGAGCCAGAGAATTGCTCGGGGAAGTTTCTAGACAAGGAGAATTAACTGGTCATAGAGTTCCTTGCCTTCTCATTGCCGCTAAGGATGACTTAACTCCATACCCGAGGGCAGTACAAGATTCGGTGAAGGTCACTGAGGAATTGGGGATAGAGGCACCCATTCATGTAAGCATGAAATTAGGTGATTCAAGTAATGTGTATGATAAGATTGTTAGCGCTGCAGAACACCCTCATTTGAATATTCCTGAAACTGATATTGGGAGGAAGAGAAAGCTGTACCATCAGCTTCTTCATCACACTCTTATATTTGCCTCAGTTGGGGCTGCAATGGCAGTTGTCGGTTTGGCAGCTTTCCGTGGACTTGCAGTGAAGAAAAATTCTGCTTAG 1911 0.4479 MAAPCGVRVAVVGDRRTGKSSLIAAMASESFPDAVPTVLPPTLLPDDCFPDRLPLTIIDTPSSLEKRGKRNEELKRADVVVLTYACDEPMTITRLSTYWLPELKGLEVKAPVVVVGCKLDLQDENQQINLENLMKQLLQQSGHIVTCLECSAATLYQVPEVFYFAQKAVLHPVDPLFDHERQALTDRCLRALRRIFVLCDRDMDDALNDAELNGFQIRCFDTPLQPSELKEVRTLIQQQAPEGTNQRGLTFPGFVYIHNTFLKKGRPETIWTVLRRFGYNNDLKLRDDFLPVPSNYASDQSVELTSEAVEFLNGIFRLLDTDRDRALQPAELDKLFSTAPESPWSDDPYKDAVERTGAGYMTLGGFLSQWALMTLLDPPSSLANLIYIGYSGNPAAALRVTHRRSVDRKKQKAERNVFQCYVFGSKNAGKSTLLYSFLRRPFSDTYTPTMVEQYAANVVELIGGTRKTLILREIPEDEVKNFLSNRDCLAASDVAVFVYDGSDEISWKRARELLGEVSRQGELTGHRVPCLLIAAKDDLTPYPRAVQDSVKVTEELGIEAPIHVSMKLGDSSNVYDKIVSAAEHPHLNIPETDIGRKRKLYHQLLHHTLIFASVGAAMAVVGLAAFRGLAVKKNSA 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1723 636 PRINTS Transforming protein P21 ras signature 7 28 - -
Mibi02g1723 636 PRINTS Transforming protein P21 ras signature 147 169 - -
Mibi02g1723 636 PRINTS Transforming protein P21 ras signature 108 121 - -
Mibi02g1723 636 FunFam Mitochondrial Rho GTPase 285 475 - -
Mibi02g1723 636 CDD Miro2 414 593 - -
Mibi02g1723 636 PIRSF Miro 3 636 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0005741|GO:0007005
Mibi02g1723 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 588 IPR027417 -
Mibi02g1723 636 SUPERFAMILY EF-hand 176 372 IPR011992 -
Mibi02g1723 636 ProSiteProfiles EF-hand calcium-binding domain profile. 307 342 IPR002048 GO:0005509
Mibi02g1723 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 204 IPR027417 -
Mibi02g1723 636 Pfam EF hand associated 222 307 IPR013567 -
Mibi02g1723 636 SMART rab_sub_5 7 172 - -
Mibi02g1723 636 FunFam Mitochondrial Rho GTPase 482 583 - -
Mibi02g1723 636 SMART rho_sub_3 9 172 IPR001806 GO:0003924|GO:0005525
Mibi02g1723 636 Gene3D - 6 174 IPR027417 -
Mibi02g1723 636 Pfam Ras family 9 169 IPR001806 GO:0003924|GO:0005525
Mibi02g1723 636 Pfam Ras family 422 547 IPR001806 GO:0003924|GO:0005525
Mibi02g1723 636 Pfam EF hand associated 344 412 IPR013566 -
Mibi02g1723 636 PANTHER RHO FAMILY GTPASE 419 581 IPR003578 GO:0005525|GO:0007264
Mibi02g1723 636 Gene3D - 179 283 - -
Mibi02g1723 636 Gene3D - 481 582 IPR027417 -
Mibi02g1723 636 ProSitePatterns EF-hand calcium-binding domain. 320 332 IPR018247 -
Mibi02g1723 636 ProSiteProfiles Miro domain profile. 415 584 IPR020860 GO:0003924|GO:0005525
Mibi02g1723 636 Gene3D - 285 475 - -
Mibi02g1723 636 FunFam Mitochondrial Rho GTPase 179 283 - -
Mibi02g1723 636 ProSiteProfiles Miro domain profile. 4 171 IPR020860 GO:0003924|GO:0005525
Mibi02g1723 636 FunFam Mitochondrial Rho GTPase 4 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1723 Mibi-ChrMibi02 17642763 17651414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1723 7 635 EF-hand Containing Proteins AT3G63150 59.459 0.0 800