Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1716 ATGGATCAGCCTCCATCCTCTGCTGTTAGGCGCAGCTTGAAGCGCAAATTCGAAGAAGAATTCGAGGAAGAAAGGGCGGATCAACCAACGGCTAATCGTAATCCGTTGGTTCTCGATCCTCTCAGGACTCATCATAATATCTTGACTGAAGTTGTGTCGCAAGTCGATATTCTCAACTCCAGTTTCTCTTCGTCTCAGTCGGATCGCCTCGCCGCCAAGCGTGCTGCTCATGTTCTCTGTGAACTCGCAAAGAATGAGGAACTTGTGAGTGGTATAGTGGACTGTGGAGCAGTTCCTGCTTTGTTAAGATATCTGAAAGCACTAGAACCAGTCAGAGAAGGTGATGGCGTTCCCAAGCCTTACGAGCATGAGGTGGAAAAGGGATGTGCCTTTGCCCTTGGGCTTCTTGCCGTTAAACCAGAGCATCAACAACTCATTGTTGATGCTGGAGCTCTGCCCTGTCTTGTGGATTTGTTAAAGAGGCGCAAGTCTTGTGGCAATTCACGGGCACTTACTGGCCTTATAAAGAGAGTAGCTGATGCCATCACAAACCTTGCGCATGAAAATAGCAGCGTTAAAACCCGTGTTAGGATGGAAGGTGGTATCCCTCCTCTTGTTGAATTGCTTAAATTTGATGATGCAAAGGTACAAAGGGCATCTGCAGGGGCCTTACGAACTCTTGCATTTAAAAATGACGAGAACAAAAATCAGATTGTTGGATGCAATGCCCTACCTACTCTTGTACTTATGCTAGGATCACAGGATTCTGCAATACATTCTGAAGCGGTTGGTGTGATAGGAAATCTGGTTCACTCTTCTCCAAACATAAAGAGGGAAGTTCTTCAAGCTGGTGCTCTACAACCTGTAATTGGATTACTTAGATCTTGCTGTTCGGAGAGCCAAAGAGAAGCAGCTCTTTTAATTGGTCAATTTGCTGCAACAGATTCTGATTGCAAGGTTCATATTGTTCAAAGAGGGGCCATCCAGCCACTGATTGACATGCTTAAGTCTCCAGATGCACAGCTTCGGGAAATGTCAGCTTTTGCACTTGGAAGATTGGCTCAGGACACACACAATCAAGCTGGTATTGCTTATAATGGAGGTATAGAGCCTCTACTCAACCTTCTTTGCTCCAAGAATGGACCTCTCCAGCATAATGCAGCCTTTGCTCTATATGGTCTTGCTGATAATGAGGACAATGTTGCGGATATTGTTAAGGTTGGTGGTGTTCAAAAGCTACAAGATGGAGATTTTAAAGCTCAACCTACCAAAGAGTGTGTAGGAAAGACAATGAAGAGACTAGAGGAAAAAATGCAAGGACGAGTGCTGGAACAACTTTTGTACCTTATGCGATGTGGAGAAAAGAATATTCAAAGACGCGTGGCTCTAACTCTTGCTCATTTATGTGCCCCAGATGATCGAAAATTAATTTTTGTTGACAACAAGGGGATTGATTTCCTGCTGGATCTTTTAGAATCTACAAATCTCAAACAGAAACGTGATGCTGCAATGGCACTTCACTCGTTGGCTGTCAGAACCACATTAGTCTCTCCCTTCGATGCTACTACTCCATCCCCAACTCCTCAGGTATACTTAGGGGAGCAATACGTAAATAACTCTACACTTTCTGATGTCACCTTTTTAGTTGAAGGGAAACGATTCTATGCTCACCGAATTTGTTTACTTGCTTCTTCTGAAGCGTTTCGAGCCATGTTTGACGGTGGTTATCGGGAAAGAGAAGCCAAAGATATAGAGATTCCTAACATTAAATGGGATGTCTTTGAGTTGATGATGAGATTTATTTATGTAGGAGCTGTACATGTCAATTTGAATATTGCTCAGGATCTTTTAAGAGCTGCTGATCAATATCTTTTGGATAGTCTTAAGCAACATTGCGAATATGTAATTGCTCAGGATATTTCAGTGGAAAATGTTTCTCTTATGTACGAATTGTCAGAGGCATTCAATGCTATGTCATTGAGGCAAGCATGCATTTTATTTTTGTTGGAGCAATTTGACAAATTGAGTGCCAAACCATGGTACGGTCGTTTGATGCGACGTATTGTCCCAGATGTACGTGAATTTTTCAAAAGGTTACTTGTAAAGCCTACACGAGGAGAATCATAA 2127 0.4283 MDQPPSSAVRRSLKRKFEEEFEEERADQPTANRNPLVLDPLRTHHNILTEVVSQVDILNSSFSSSQSDRLAAKRAAHVLCELAKNEELVSGIVDCGAVPALLRYLKALEPVREGDGVPKPYEHEVEKGCAFALGLLAVKPEHQQLIVDAGALPCLVDLLKRRKSCGNSRALTGLIKRVADAITNLAHENSSVKTRVRMEGGIPPLVELLKFDDAKVQRASAGALRTLAFKNDENKNQIVGCNALPTLVLMLGSQDSAIHSEAVGVIGNLVHSSPNIKREVLQAGALQPVIGLLRSCCSESQREAALLIGQFAATDSDCKVHIVQRGAIQPLIDMLKSPDAQLREMSAFALGRLAQDTHNQAGIAYNGGIEPLLNLLCSKNGPLQHNAAFALYGLADNEDNVADIVKVGGVQKLQDGDFKAQPTKECVGKTMKRLEEKMQGRVLEQLLYLMRCGEKNIQRRVALTLAHLCAPDDRKLIFVDNKGIDFLLDLLESTNLKQKRDAAMALHSLAVRTTLVSPFDATTPSPTPQVYLGEQYVNNSTLSDVTFLVEGKRFYAHRICLLASSEAFRAMFDGGYREREAKDIEIPNIKWDVFELMMRFIYVGAVHVNLNIAQDLLRAADQYLLDSLKQHCEYVIAQDISVENVSLMYELSEAFNAMSLRQACILFLLEQFDKLSAKPWYGRLMRRIVPDVREFFKRLLVKPTRGES 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1716 708 MobiDBLite consensus disorder prediction 1 35 - -
Mibi02g1716 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 150 200 IPR000225 GO:0005515
Mibi02g1716 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 200 235 IPR000225 GO:0005515
Mibi02g1716 708 Pfam Armadillo/beta-catenin-like repeat 315 354 IPR000225 GO:0005515
Mibi02g1716 708 Pfam Armadillo/beta-catenin-like repeat 231 270 IPR000225 GO:0005515
Mibi02g1716 708 Pfam Armadillo/beta-catenin-like repeat 196 228 IPR000225 GO:0005515
Mibi02g1716 708 SMART arm_5 85 138 IPR000225 GO:0005515
Mibi02g1716 708 SMART arm_5 139 187 IPR000225 GO:0005515
Mibi02g1716 708 SMART arm_5 471 511 IPR000225 GO:0005515
Mibi02g1716 708 SMART arm_5 231 271 IPR000225 GO:0005515
Mibi02g1716 708 SMART arm_5 356 396 IPR000225 GO:0005515
Mibi02g1716 708 SMART arm_5 273 313 IPR000225 GO:0005515
Mibi02g1716 708 SMART arm_5 315 355 IPR000225 GO:0005515
Mibi02g1716 708 SMART arm_5 189 229 IPR000225 GO:0005515
Mibi02g1716 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 242 284 IPR000225 GO:0005515
Mibi02g1716 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 326 368 IPR000225 GO:0005515
Mibi02g1716 708 Pfam BTB/POZ domain 536 638 IPR000210 GO:0005515
Mibi02g1716 708 Gene3D - 41 164 IPR011989 -
Mibi02g1716 708 SUPERFAMILY POZ domain 534 637 IPR011333 -
Mibi02g1716 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 367 409 IPR000225 GO:0005515
Mibi02g1716 708 Gene3D Potassium Channel Kv1.1; Chain A 524 669 IPR011333 -
Mibi02g1716 708 Gene3D - 273 417 IPR011989 -
Mibi02g1716 708 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 5 704 IPR044282 -
Mibi02g1716 708 MobiDBLite consensus disorder prediction 9 29 - -
Mibi02g1716 708 SUPERFAMILY ARM repeat 68 509 IPR016024 -
Mibi02g1716 708 SMART BTB_4 543 640 IPR000210 GO:0005515
Mibi02g1716 708 Gene3D - 424 518 IPR011989 -
Mibi02g1716 708 Gene3D - 165 272 IPR011989 -
Mibi02g1716 708 ProSiteProfiles BTB domain profile. 543 610 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1716 Mibi-ChrMibi02 17601619 17607472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1716 202 510 U-box Gene Family AT3G46510 25.806 1.34e-14 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mibi02g1716 BTB 1.5e-25 CL0033