Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1706 ATGTGGCCCAGGCCCATTAATAGGCGGGTGTGTGATAACCTCCTTGCTAAATTCAACACCGCCTCATCCGAGGGATCTAAAGCAGCAAGTGTATCTGAAAACACCTCTGATGTTCACCCCACAATAGACTTGTCATCTGAAGACACGACTACTCCCAACCTCTCTGATAATCTTACCCATAATGCACATTATAAGGGGAAAAAAGTAGCTCTACATATTTGCGTGTTCAAAAAGATGACTCAGCAACAGTCACACAGACGTCATCCACTACTCGAGCAGGATAAAAATCTGTTCTTGGAGAAATGGCATGACCTAAACATGGAGGTTCCTGTTTTGGAAGGTGAGGGTTTGGCGCATGAAACAGAGGCATTAGACATGACAATTCAAGACAATCAGGTTAAGCCTGTTGTACAACAAGAAGGGGGCTTTGATTGGGATTCGGGTAGCAATGTAAATATCAGGTTAGCCGAAAATGGGGGCAAGAGGAGTAGTTTAAGCTGTGATGATGACATTGGAAGAGTTGACATTGGGGTGGAGGTGAAGAAAAAGGGTAACTTGGACGATCAGGTGTTGATTGGTGGTGAAGTATCGTCTTTAGTATCCGGTAAAGCTGACAATAAGATATCTGATGATCAAGGTGTACTAAAATTGACCGTTGAGAATAAAGATGCGGAGCCAATTGTGCAACAAGAATGTGACTTAGATTGTGATATGGGTATGGATGGGAATGTCGGGATTGTTGATGACAAGAGCAAAAAGAGTAATTTAAGCTGTGATGATAACTTTGGAGGGGTCGACATTGAGGTGGAGGTGATGAAGAAAGATTGTTTAAGTGATAAAATGCAGATTGGTAGTCAAGTGTTGTGCTCAGTGTCGAAGGGAGCCGTCAGTAAAATATCTGATGGAGAGACAGCTGAGAATGAGGAAGTGGAGCCAAACCAACAACCATGTGACTTAGAGTTGGGTGGAGGCCAGAGTGGAAATGTTGGATCGGCTAAGACCAGGATTAAGAGGAATACTTCAAGGTCTGGTCGTTGCTTTGAAGGACTTGATATTGAGATGGAGTTGAAGAAGTTAGCAAATGATGAAGTGAAGACTAGTGGTCGAGTATTGCGTTCAATGTCAAATAAAGTAGACAGTAAGATATTTCACGGTGGAGAAGCTGATGAGGTGTTGGTTGGGAAAAATGGAGGGGATGAACATGTTTGGTCTGAGAAAAATAAGGTTACGGTGGAAAAGGAAGAAGGGGATCATTTTGTTATTAACAGTTATGAGGAGGGAGTTGGTGGGAAAATGGGAGGCAGGGAAAGAAGGAAGTTGAAACGGAAGCGTGGCAGGCCCCCTAAATTGAAGGTGGAAGAGCAAGATCAGTCAGCTGGTAATATGCGACAGAGATGTGGCAATCCTTCCGAACTGAGGATGGAAGAGCAAGATCAATCTGTTAGTAAGCTGCAACGGAAGCGTGGAAGGCCCCCCAAAGTAAAGATGGTTGAGCAAGATCAACTAGTTAGTAATATGCAACATAAGTGTGTGGAAGAGCAAGATCAATCAGTTGGTAGTCTACAACAGGAATGTGGTAGTCCTCCCAAAGTGAAGATTGAAGAGCAAGATCAATTTGTTGGTAACATGCGACGGAAGCGTGGAAGGCCCCCCAAGCAAAAGAAGCGTGGAAGACCCCCCAAGCAACAGAAGCGTGGAAGGCCTCCAAAAATGAAGATGGAAGAGCAAGATCAACTAGTTGGTAATACGCAACGGAAGCGTGGAAGGCCTTTTAAAGTGAAAATGGAAGCGCAAGATCAACTAGTTGGTAATACTCAACGGAAGCGTGGAAGGCCTTTCAAAGTGAAGATGGAAGTGCAAGATGTACTAGTTGGTAATATGCAACTTAAGCGTGGAAGGCCCCCCAAAACAAAGATGGGAGAGCATGATCAACTTCCTGGCAAAAAAAAGCCAGGGAAGCGTGGAAGGCCACCCAAAAGTGGGAAGAAAACTAATAATCTGGGAGTAGCTCGATACAGAAAGGGAAAGGTGCACTTTCAAAAAGGTAGAAAAGGTGTAGTCGTGAGAGACAGTAGAAATATGAATGCAGTTGATATGTGCTTGAAAATGAGATATTGTGTAAAAGAATCGGAAAAGAGATGTTCTCCTGTTAAGAAGAATGAATTTGGGAGCCTTACGAATACCAAGAATAGTGCATTGACTTCACCATTAATGTCAAATTCTGCAAATGCTCTCGTTAAGAAGGAAAAGGGAATTAAGCAAGCAAAGCAGTTGGTGAGGCAACACATTTTGGAGCTGCTCTTGGCTGCTGGCTGGATTGTTGATTACAGACCTAGGAATGGCAGAGAGTATAAAGATGCGGTGTATGTTAGTCCAGATGGAAAGACTCACTGGTCGATTACCCTGGCCTACAAAAGGCTTCAGATGCACTGTGAAGCTGGTGATGGTGAAGGCGAGGTATACATTCCAGGTTTCAAATTTGTGCCCATAGCCTTTGAGGAATTCAATATTCTAACTAAGATCATTAAAAATAGAAGGAAAGATAAAGGTCAATTGAAACAAACAGGAGGTAAAGATGGAGGCTCAAATATGTCACTGAAGGGGAAAGTGAAGAGGAAAATGTCACTTGTTGAGGATGACAACTTAGACGATACATCACATAAAAGGGTTTCAGTTCTGGTCAAGTGTCGTAAACGGCAGAAAACACACAATAAGAAGCGAAGTGTTTTTATGGTTCGTAATGCTGATGAGATAGATTCGGAGACTAATGGATACACACTTTACTCTGGAAAGCGAACTGTGCTTGCTTGGATGATTGATTTGGGAACAGTCCTGCAAAATGAGAGGGTTCACTATGTGAACGACAGAAGGGAAGGTGCGAAACTGGAGGGTAGGATCACAAGAGACGGAATTCATTGTGACTGCTGCAATGAAACTGTAACAATGTCAGAATTTGAAGACCATGCAGGAAGCAAACTCTCTGATCCACTAACAAATATACATGTAGAGAGAGGAATGTCTCTTCTGCAATGTTTGCTAGACTCATGGAATAAACAAGATGAACATGAAAGAAAAGGCTTTCATTTTGTTGATACCACAAGTGAAGACCCTAATGATGAAGCATGTGGTGTCTGTGGAGATGGTGGAGACTTGATCTGTTATCATAGATCTTGTGTTGAGGTAAATGGCATCCAAGCTGATGACTCTAATTTCGCATTCTATTGTGGAAGCAGATGTGAGGAGGTAGGACTTATTCATAGACTTGAAATGCTTCTTGGGGTTAAACATGACATTGAAGATGGACTTTCTTGGACTTTCATTCGCCGGTCAGATGTTGGATCTGATGCTTCTCAGATAGAATCTCATTCAAACTTCAATCGCCTGAACTATACTGGTTTTATTACTGCTATCCTGGAGAGAGGCGATGAGGTCATTGGCGCAGCATCTATTAGTGCCATTGAATCTGCTAGTATAATTTATGTTGAGTTATTGGTCATACCAGCAGTCTCAGAAGTCAGAGATACTTGGACTTCTGCTTTTGGGTTTGAGCCGCTTGAAGTGACCAGGAAGCAAATGATAAAGAATTTCAATCTGTTGGTTTTCCCTCATGTAGATATGTTAATGAAAGAGATGAAGAAGCCTAAAGTCTCAAATACTAGACTTCAGAAGAATCAAAGTACACTTGAGGAAGCAACTGACTGTAATGAGCCAAGTTCATTAAGGTCTGATTTGATCACTTCTGCCCCAATGAATGATAGACACGTGTTTGTTGAGTCTGGCTCTCCTGATGGCTTATTGAATAACCCACATCACATTACTGAAGAGACTGTACGGTATGATACAAGTCCACAATACGCAAAATGTGAAGTTGACAGTGATAGTTTAACAGTGGAAGACATTACCTCTGTAAAAGCACATGATTATTTGAGTGCTGCTCATCTTCAAGCTGAAGAGAAAATCAATCATGATTGTGTTCAATCGCATCCCATGGGATCAAAAGAAATAAATTCTGGATCTATCAATGGCTGTGATTCTCGGCAGACAACCAGTGGTTATTGTGCCTGTGATGATGAAGCGAATTTCGAGATCACTAAAGCTGATAAATCAGACTTGTGTTATGCAAAAGCAGCCAATCTCCATAATCTAGTACACTATGGAGATTGTCAATCAATACAGATAGCTTCAGGATCCTGCAAGGATGATATAGCAAACGGTGTAGATCTTAGTGATAAGCCTGGTATAAATCAGTCTTCAGAGTTACCTGAGCTTGACTTTGAGGTCAACAAAATTGGACAAGGTGATGCTCCATCGTTTTGTGGTACTTCATGTGGTAATACAGAAGTTATGGTTCTGTCCAAGGAAGCCAGTTGA 4371 0.4207 MWPRPINRRVCDNLLAKFNTASSEGSKAASVSENTSDVHPTIDLSSEDTTTPNLSDNLTHNAHYKGKKVALHICVFKKMTQQQSHRRHPLLEQDKNLFLEKWHDLNMEVPVLEGEGLAHETEALDMTIQDNQVKPVVQQEGGFDWDSGSNVNIRLAENGGKRSSLSCDDDIGRVDIGVEVKKKGNLDDQVLIGGEVSSLVSGKADNKISDDQGVLKLTVENKDAEPIVQQECDLDCDMGMDGNVGIVDDKSKKSNLSCDDNFGGVDIEVEVMKKDCLSDKMQIGSQVLCSVSKGAVSKISDGETAENEEVEPNQQPCDLELGGGQSGNVGSAKTRIKRNTSRSGRCFEGLDIEMELKKLANDEVKTSGRVLRSMSNKVDSKIFHGGEADEVLVGKNGGDEHVWSEKNKVTVEKEEGDHFVINSYEEGVGGKMGGRERRKLKRKRGRPPKLKVEEQDQSAGNMRQRCGNPSELRMEEQDQSVSKLQRKRGRPPKVKMVEQDQLVSNMQHKCVEEQDQSVGSLQQECGSPPKVKIEEQDQFVGNMRRKRGRPPKQKKRGRPPKQQKRGRPPKMKMEEQDQLVGNTQRKRGRPFKVKMEAQDQLVGNTQRKRGRPFKVKMEVQDVLVGNMQLKRGRPPKTKMGEHDQLPGKKKPGKRGRPPKSGKKTNNLGVARYRKGKVHFQKGRKGVVVRDSRNMNAVDMCLKMRYCVKESEKRCSPVKKNEFGSLTNTKNSALTSPLMSNSANALVKKEKGIKQAKQLVRQHILELLLAAGWIVDYRPRNGREYKDAVYVSPDGKTHWSITLAYKRLQMHCEAGDGEGEVYIPGFKFVPIAFEEFNILTKIIKNRRKDKGQLKQTGGKDGGSNMSLKGKVKRKMSLVEDDNLDDTSHKRVSVLVKCRKRQKTHNKKRSVFMVRNADEIDSETNGYTLYSGKRTVLAWMIDLGTVLQNERVHYVNDRREGAKLEGRITRDGIHCDCCNETVTMSEFEDHAGSKLSDPLTNIHVERGMSLLQCLLDSWNKQDEHERKGFHFVDTTSEDPNDEACGVCGDGGDLICYHRSCVEVNGIQADDSNFAFYCGSRCEEVGLIHRLEMLLGVKHDIEDGLSWTFIRRSDVGSDASQIESHSNFNRLNYTGFITAILERGDEVIGAASISAIESASIIYVELLVIPAVSEVRDTWTSAFGFEPLEVTRKQMIKNFNLLVFPHVDMLMKEMKKPKVSNTRLQKNQSTLEEATDCNEPSSLRSDLITSAPMNDRHVFVESGSPDGLLNNPHHITEETVRYDTSPQYAKCEVDSDSLTVEDITSVKAHDYLSAAHLQAEEKINHDCVQSHPMGSKEINSGSINGCDSRQTTSGYCACDDEANFEITKADKSDLCYAKAANLHNLVHYGDCQSIQIASGSCKDDIANGVDLSDKPGINQSSELPELDFEVNKIGQGDAPSFCGTSCGNTEVMVLSKEAS 1456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1706 1456 MobiDBLite consensus disorder prediction 300 335 - -
Mibi02g1706 1456 PRINTS AT-hook-like domain signature 542 553 IPR017956 GO:0003677
Mibi02g1706 1456 PRINTS AT-hook-like domain signature 441 451 IPR017956 GO:0003677
Mibi02g1706 1456 PRINTS AT-hook-like domain signature 560 570 IPR017956 GO:0003677
Mibi02g1706 1456 MobiDBLite consensus disorder prediction 634 650 - -
Mibi02g1706 1456 PANTHER PHD FINGER PROTEIN 12 1153 1337 IPR042163 GO:0003714|GO:0045892
Mibi02g1706 1456 SMART AT_hook_2 485 497 IPR017956 GO:0003677
Mibi02g1706 1456 SMART AT_hook_2 651 663 IPR017956 GO:0003677
Mibi02g1706 1456 SMART AT_hook_2 441 453 IPR017956 GO:0003677
Mibi02g1706 1456 SMART AT_hook_2 628 640 IPR017956 GO:0003677
Mibi02g1706 1456 SMART AT_hook_2 562 574 IPR017956 GO:0003677
Mibi02g1706 1456 SMART AT_hook_2 606 618 IPR017956 GO:0003677
Mibi02g1706 1456 SMART AT_hook_2 544 556 IPR017956 GO:0003677
Mibi02g1706 1456 SMART AT_hook_2 584 596 IPR017956 GO:0003677
Mibi02g1706 1456 MobiDBLite consensus disorder prediction 22 51 - -
Mibi02g1706 1456 MobiDBLite consensus disorder prediction 567 582 - -
Mibi02g1706 1456 Pfam Tify domain binding domain 964 1013 IPR032308 -
Mibi02g1706 1456 MobiDBLite consensus disorder prediction 1218 1240 - -
Mibi02g1706 1456 MobiDBLite consensus disorder prediction 545 566 - -
Mibi02g1706 1456 MobiDBLite consensus disorder prediction 469 495 - -
Mibi02g1706 1456 MobiDBLite consensus disorder prediction 425 670 - -
Mibi02g1706 1456 MobiDBLite consensus disorder prediction 500 524 - -
Mibi02g1706 1456 MobiDBLite consensus disorder prediction 1216 1240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1706 Mibi-ChrMibi02 17449792 17463024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1706 470 1219 PHD Transcription Factor Family AT5G36670 28.132 2.16e-87 309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1706 02 17449792 17463024 Mibi06g2475 06 44986462 44992328 CCT
Mibi02g1706 02 17449792 17463024 Mibi02g1706 02 17449792 17463024 ECH