Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1668 ATGAATTATCCGTATACTATAAAAGAAGAGTACTTGGAACCTTGTTCATCTGAAGTAGGAGGTGAGGTGGCAATGGTTTTTCCTCCGCAGCCAAGGCAGGGACTTCATGAAACAGGGCCACCTCCATTTCTCACTAAGACATTTGATATGGTGGAAGACCCTTTGACCAATCACATAGTCTCGTGGAGCAGAGGAGGATCAAGTTTTATTATTTGGGATCCTTGTTCTTTATCTACCAATCTCCTCCCTAGATTCTTCAAGCACAATAATTTCTCTAGCTTTGTCAGGCAATTGAACACTTACGGTTTTAGAAAAATTGATCCAGACAGATGGGAGTTTTCAAACGAAGAATTCATAAGAGGACACAAGCATTTACTGAGGAACATACGAAGAAGGAGAGCACCTTCTTCTCAGGTTATTCCATCCTCCCAAGTACCAAGTCATTGTGTTGAAGTTGGTGGATTTGGACAAGAGGAAGAAATTCTACGTTTAAGACGTGACAAGCAAGTTTTAATGATGGAACTTGTGAAGCTTAGGCAGCAGCAACAGAACACAAGAGCCTACCTTCAGGCAATGGAACATAGGTTACGAGGAACAGAAATGAAGCAGCAACAAATGATGGCTTTCTTAGCCAGAGTATTGGAAAATCCAGCTTTTCTTCATCAACTAATACAACAGAGTGAGAGACAGGAACTGGAAGAAGCCATGACTAAGAAAAGAAGAAGGTCGATTGATCAAGTACCGTTTGATGTTGTTGAATCAAGCAGTGAAAGTGAGGGAAGGAATCATGTTAAAGTTGAAGTGTCTGAGCTTGAAGTTTTAGCTATGGAAATGCAAGGTCTTGGTAGTAGGGGTAAGAGAGAACAGGAAGCACTTGAATCGCCAGAGAGGCTGGATGACAATGAACTTGATGAAGGATTCTGGGAAGAGTTTTTCAGTGAAAATGTTGAGGGTGAACTGGATATTCCAAGTGATGAAGGTGAAGGTGAAGGTGAAGGTGAAGATGTAGTAGATATAAACATCTTGGCCAAGCGTTTGGGTTACATGGGTTCAAGTCCTAAGTGA 1065 0.415 MNYPYTIKEEYLEPCSSEVGGEVAMVFPPQPRQGLHETGPPPFLTKTFDMVEDPLTNHIVSWSRGGSSFIIWDPCSLSTNLLPRFFKHNNFSSFVRQLNTYGFRKIDPDRWEFSNEEFIRGHKHLLRNIRRRRAPSSQVIPSSQVPSHCVEVGGFGQEEEILRLRRDKQVLMMELVKLRQQQQNTRAYLQAMEHRLRGTEMKQQQMMAFLARVLENPAFLHQLIQQSERQELEEAMTKKRRRSIDQVPFDVVESSSESEGRNHVKVEVSELEVLAMEMQGLGSRGKREQEALESPERLDDNELDEGFWEEFFSENVEGELDIPSDEGEGEGEGEDVVDINILAKRLGYMGSSPK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1668 354 Pfam HSF-type DNA-binding 43 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1668 354 Coils Coil 161 181 - -
Mibi02g1668 354 FunFam Heat shock transcription factor 1 36 133 - -
Mibi02g1668 354 Gene3D - 35 133 IPR036388 -
Mibi02g1668 354 ProSitePatterns HSF-type DNA-binding domain signature. 82 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1668 354 PRINTS Heat shock factor (HSF) domain signature 94 106 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1668 354 PRINTS Heat shock factor (HSF) domain signature 81 93 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1668 354 PRINTS Heat shock factor (HSF) domain signature 43 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1668 354 SMART hsfneu3 39 132 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi02g1668 354 SUPERFAMILY "Winged helix" DNA-binding domain 39 132 IPR036390 -
Mibi02g1668 354 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 29 265 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1668 Mibi-ChrMibi02 16982572 16983729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1668 29 352 HSF AT3G22830 48.501 8.74e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi02g1668 HSF_DNA-bind 4.6e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1668 02 16982572 16983729 Mibi06g2458 06 44834260 44837718 CCT