Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1667 ATGTTTCCTGCGGCTATGTCCAATTCCACTACTTCTTTGTCCGTAGAATCATCTGTCCCTTCTGCTTCTACACTTCATGACCTCTCTGCACTAAATCCCGTACTCCCCACAATTCCTCCTCCTCAGCCTCCAAAGATCAAGAAAAAGAGAAGCCTCCCCGGAAACCCAGACCCAGATGCAGAAGTGATAGCGTTATCTCCGAAGACTCTTTTGGCGACGAATAGGTTTGTGTGTGAGATCTGCAACAAGGGTTTCCAAAGGGACCAGAATCTTCAACTTCATAGGAGAGGGCATAACCTGCCATGGAAGCTGAAGCAAAGGAACAACAAAGAGGTGAAAAAGAGAGCCTACGTTTGCCCCGAGCCTACATGTGTTCATCACAACCCATCGAGGGCTCTTGGGGATCTCACTGGAATTAAGAAACATTACTGCAGAAAACATGGAGAGAAGAAGTGGAAATGCGAGAAATGCTCAAAGATCTATGCTGTTCAGTCTGATTGGAAAGCTCACTCTAAAACCTGTGGAACTAGAGAATATAGATGTGATTGTGGAACTCTCTTCTCCAGGAAGGACAGCTTCATAACACATAGAGCATTCTGTGATGCATTGGCGGAAGAAAGTGCAAGACTCACAGCAAATCAACTAGCCTCCACCACCGCCAACAACCCATTGGTCCAATCTCTCTTACTATATCCCAACCAACACAACACCACCACCTTCCTCAACAACAACCCATGGAACCCACCTTCCCAACAAAACCCTAACCCTACCAACCACCACCTTCTCCAAGTTAAGCCTGAAGCTCAACATTTCAACATGCCCCATTCATTACTTCATGAACCTCCCCATCATTCCTTCCAAAACCCACACATAATAATGCCCGCACCATCTTCCTCAAACGCTGCCACGTCAGCACACCTTTCTGCCACTGCTCTCCTCCAAAAGGCTGCTTCTGTGGGGGCCACCCAGATCACACCCCAGCCAACTCAGCCTCAGCCTCGCCACCTGACTCAGCTTGGCATGACCGGCGAGTTTGGATCGGTGAGTCAACTCGACCCGTTGGTGCCTGACTATGTGAGAGAGTTTGCAACTACTCGGAATTTTAAGAATGAGCATCTGACAAGGGACTTTTTGGGTCTCACCGATGATGGGAATAACGGAGGAGGAGACCGCGGTGATAACGGTGGTCCGGTCAACGTGAAGAATGTGATGACGGCGTTTACGGGGGATGTGTACGAACACCACCATCATCATCACTCGGTCTTCAAGTCCAGACAAGGTTTCGGATTTGTTGGGACTTCCAATGCCCCTGAGACTTGGACCAATTATTAA 1332 0.4857 MFPAAMSNSTTSLSVESSVPSASTLHDLSALNPVLPTIPPPQPPKIKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKEVKKRAYVCPEPTCVHHNPSRALGDLTGIKKHYCRKHGEKKWKCEKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARLTANQLASTTANNPLVQSLLLYPNQHNTTTFLNNNPWNPPSQQNPNPTNHHLLQVKPEAQHFNMPHSLLHEPPHHSFQNPHIIMPAPSSSNAATSAHLSATALLQKAASVGATQITPQPTQPQPRHLTQLGMTGEFGSVSQLDPLVPDYVREFATTRNFKNEHLTRDFLGLTDDGNNGGGDRGDNGGPVNVKNVMTAFTGDVYEHHHHHHSVFKSRQGFGFVGTSNAPETWTNY 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1667 443 Gene3D Classic Zinc Finger 56 124 - -
Mibi02g1667 443 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 98 IPR013087 -
Mibi02g1667 443 MobiDBLite consensus disorder prediction 31 60 - -
Mibi02g1667 443 SMART c2h2final6 152 172 IPR013087 -
Mibi02g1667 443 SMART c2h2final6 117 147 IPR013087 -
Mibi02g1667 443 SMART c2h2final6 76 98 IPR013087 -
Mibi02g1667 443 ProSitePatterns Zinc finger C2H2 type domain signature. 78 98 IPR013087 -
Mibi02g1667 443 SUPERFAMILY beta-beta-alpha zinc fingers 75 172 IPR036236 -
Mibi02g1667 443 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 25 402 IPR031140 -
Mibi02g1667 443 FunFam protein indeterminate-domain 5, chloroplastic-like 130 209 - -
Mibi02g1667 443 FunFam protein indeterminate-domain 12-like 55 123 - -
Mibi02g1667 443 Gene3D Classic Zinc Finger 146 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1667 Mibi-ChrMibi02 16972226 16975555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1667 11 432 IDZ Gene Family AT4G02670 51.481 4.42e-128 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi02g1667 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1667 02 16972226 16975555 Mibi06g2774 06 47445726 47449623 CCT