Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1650 ATGGCCCTGTCTCCTATTCCCATCCAACGCTCCTCCTTTCACTCCACCTCCCCCCAATCCCAGCCGTCCATTTGTGGTCCCCACCCATGTCCCCCTCATGTCGCTCCCCTCCCCTACACCCATATCTGTCCTCTCCCTTACCACACCTCACGCGCCCTCCCTCCGTGTGGCTATCCCTCCCTGCGCTGTCCACATCTGGTTGGCCGCTGTGGTTTAACGTGTATGGCACCTTTCAGACATAATAATCGAGATATGGGTATGAATTTGGAAGGTGAGGTAGTGATGAATCTGAAGGACACAGAGCTGAGGTTAGGATTGCCAGGAAGGGATGAGGAACAAGGTCAACCTCCATGCAACGTCAGAAGCAACAAGAGAAGTTGCCCTGAATCAACCCATGATGAGGACTCATCTGTAACACACAACAACGCCTCCAACACTTCTCATCATCAACATGAACACAACCCCCCACCACCAAAGGTACAAGTAGTGGGGTGGCCACCTGTACGATCGTACAGGAAGAACTGTGTGCAGCAGCAAAAGAATAAGGGATGTGAAGAGGGTGGGAATAATAATATGTATGTGAAAGTGAGCATGGACGGTGCTCCTTATCTCAGGAAGATTGATCTCAGGGTTTATAACACCTACCCACAACTCCTGAAGGCTTTGCAGAACATGTTCAAGTGCAGCTTTGGTGAGTACTCCGAGAGGGAAGGATATAATGGATCTGAATTCGCTCCTACTTACCAAGACAAGGATGGTGATTGGATGCTCGTTGGAGATGTCCCCTGGAATATGTTCATGTCATCTTGCAAGAGGATGAGAATCATGAAAGGATCTGAGGCTAAGGGATTGGGTACTTCTTTATGA 867 0.4948 MALSPIPIQRSSFHSTSPQSQPSICGPHPCPPHVAPLPYTHICPLPYHTSRALPPCGYPSLRCPHLVGRCGLTCMAPFRHNNRDMGMNLEGEVVMNLKDTELRLGLPGRDEEQGQPPCNVRSNKRSCPESTHDEDSSVTHNNASNTSHHQHEHNPPPPKVQVVGWPPVRSYRKNCVQQQKNKGCEEGGNNNMYVKVSMDGAPYLRKIDLRVYNTYPQLLKALQNMFKCSFGEYSEREGYNGSEFAPTYQDKDGDWMLVGDVPWNMFMSSCKRMRIMKGSEAKGLGTSL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1650 288 MobiDBLite consensus disorder prediction 137 151 - -
Mibi02g1650 288 ProSiteProfiles PB1 domain profile. 191 278 IPR000270 GO:0005515
Mibi02g1650 288 Pfam AUX/IAA family 121 285 IPR033389 -
Mibi02g1650 288 MobiDBLite consensus disorder prediction 106 161 - -
Mibi02g1650 288 FunFam Auxin-responsive protein 186 288 - -
Mibi02g1650 288 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 96 282 IPR003311 GO:0005634|GO:0006355
Mibi02g1650 288 MobiDBLite consensus disorder prediction 1 20 - -
Mibi02g1650 288 SUPERFAMILY CAD & PB1 domains 187 277 - -
Mibi02g1650 288 Gene3D - 186 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1650 Mibi-ChrMibi02 16753500 16754943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1650 194 284 B3 DNA Binding Superfamily AT2G46530 36.264 6.18e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi02g1650 AUX_IAA 6e-59 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1650 02 16753500 16754943 Mibi02g1650 02 16753500 16754943 ECH