Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1649 ATGGAAGTGATAGGCGTGAAGAAGGAGAAGATGGGCTTTGAGGAAACAGAACTCAGGCTTGGATTGCCTGGAAATAATGGAGTCTCCGATTCAGAAGTGGTTAGAAAGAGAAGTTTCTGTGAGACTGAACCAGAGACTGTGGATTTGATGTTGAATCTCTCATCATCTTCAAAGGAATCTTCAGCAGATCCAACTGATAGCATCAAGAAGGAGAAGACCCTTCTTCCCTCTGACCCTGCCAAGCCTCCTGCCAAGGCACAAGTGGTGGGTTGGCCACCAGTGAGATCGTTCAGAAAGAACATATTGAAGAGCAGTAATGGAGAAGAGAAGGAGAAAGGAAGCCCAAATAATAATAATGGAAGCTTCGTGAAAGTAAGCATGGATGGAGCTCCTTACCTTCGTAAGGTGGACCTCAAGTTGTACAACACTTACCAAGATCTCTATGATGCCTTGGCCAAAATGTTCAACTCCTTCACCATTCGCAACTGTGGATCTCAAGGAATGAAGGACTTCATGAACGAGAGTAAGCTGATGAATCTCTTGAACAGCTCCGACTATGTCCCAACCTATGAAGACAAAGATGGCGACTGGATGCTTGTGGGCGACGTCCCTTGGGAGATGTTTGTTGAGTCATGCAAGCGTTTGCGTATCATGAAAGGCAAGGAGGCTATTGGACTTGCGCCGAAAGCCATGGAGAAGTGCAAGAACAGGAGTTAG 717 0.4616 MEVIGVKKEKMGFEETELRLGLPGNNGVSDSEVVRKRSFCETEPETVDLMLNLSSSSKESSADPTDSIKKEKTLLPSDPAKPPAKAQVVGWPPVRSFRKNILKSSNGEEKEKGSPNNNNGSFVKVSMDGAPYLRKVDLKLYNTYQDLYDALAKMFNSFTIRNCGSQGMKDFMNESKLMNLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPKAMEKCKNRS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1649 238 Pfam AUX/IAA family 15 229 IPR033389 -
Mibi02g1649 238 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 225 IPR003311 GO:0005634|GO:0006355
Mibi02g1649 238 SUPERFAMILY CAD & PB1 domains 116 219 - -
Mibi02g1649 238 Gene3D - 115 232 - -
Mibi02g1649 238 MobiDBLite consensus disorder prediction 51 88 - -
Mibi02g1649 238 FunFam Auxin-responsive protein 115 230 - -
Mibi02g1649 238 ProSiteProfiles PB1 domain profile. 120 220 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1649 Mibi-ChrMibi02 16729695 16732238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1649 101 223 B3 DNA Binding Superfamily AT3G61830 30.081 5.59e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi02g1649 AUX_IAA 2.1e-81 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1649 02 16729695 16732238 Mibi02g1649 02 16729695 16732238 ECH