Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1642 ATGGCGAATCAGGTGGTAAAAGTGAAGAGGGACACGATTGCTTCATGCATGACTTGTCCTCTTTGCAATAAGCTGTATAAGGAGGCTACCACCATATCCGAATGCCTCCATACGTTTTGCAGGAAGTGCATATATGACAAGATTACAGATGAGGAATTGGAATGCTGTCCAATATGCAACATTGATTTGGGATGTGTTCCGCTAGAGAAATTGAGGCCGGACCACAGTTGGCAAGATGTAAGGGCTAAGATTTTCCCTTTGAAGAAAACAAAGGAAAAGGCACCAGAAGCTGTGCCCTCAGAACCATTACCGGCTAGAAGAAAGGAGAGATCACTTTCATCTTTGGTTGTCAGCACTCCCAGAGTATCAACACAGTCAACTATGACAGGCAGAAGAACAAAGCCTACAAGAAAGGCTAGTGCTCGCTCCACTAATTTTGCCGTTGAAAAAACCATTTTAAAAGAGGAAGATTCAGAAGAAGATCATCCAGAGAGTTCAAGCTCCCCTGATACCTCCAACAAGGCTGCCCAGACTGGTAAACAGAACTCGTCCCCTCATGATGCAAGCCAATCTGTTCCCAATAAGGAGAAAAATAATGGGGCTGAACCTTGGGAAGCAAAAACAGATCTTTGGAAACCTTTGAATTGTTTGGTGGAAGTTGCGAGCAGGAGTAAATCTTTCAAGTCCAACATGCAAGCATGTGATGCTAAACAAGAACCTGCTCAAATAAATGAGAGAGATTCTCAAGTACAAAAGTCTAAAAATAAGGACAACAGGCGGAAGTTAAAAGTTGAGGATGAAAAGACCGGCACAGATGCTGCTTCTACAGATGCAGCAAAACCCAACAACAATAAATTGCGCAGAAATCGCCGAAAAAAGGAACCTGTCATGGGTGAATCAAGCGTATCACCCCAAGTTGTGCTGGATGCAAATAGTGCTCAAGTGAAAGAAAGAACTGGTCCAATATGGCTCTCTTTAATAGCTTCTGAAGACCAGGACAAAGATGCGCCACTACCCCAAATTCCTTCCAGTTACTTAAGAATACAGGATGGAAACATGCCTGTCTCATTCATCCAGAAGTACCTAATGAAGAAATTGAATCTGGCCAGTGAAGATGAGGTTGAGATAAAATGTATGGGACAACCTGTGATCCCTGAATTGCAGCTAAACAACTTGGTTGACATGTGGCTACAAACAACATCATCATCACAGAGAATCCCGGTAACCGTTGGATCATCAGCGAAAGATTTCGTTATGGTCCTGACTTATGCTCACAAGGTGGCCCCGCCTCCATCTTGA 1299 0.4349 MANQVVKVKRDTIASCMTCPLCNKLYKEATTISECLHTFCRKCIYDKITDEELECCPICNIDLGCVPLEKLRPDHSWQDVRAKIFPLKKTKEKAPEAVPSEPLPARRKERSLSSLVVSTPRVSTQSTMTGRRTKPTRKASARSTNFAVEKTILKEEDSEEDHPESSSSPDTSNKAAQTGKQNSSPHDASQSVPNKEKNNGAEPWEAKTDLWKPLNCLVEVASRSKSFKSNMQACDAKQEPAQINERDSQVQKSKNKDNRRKLKVEDEKTGTDAASTDAAKPNNNKLRRNRRKKEPVMGESSVSPQVVLDANSAQVKERTGPIWLSLIASEDQDKDAPLPQIPSSYLRIQDGNMPVSFIQKYLMKKLNLASEDEVEIKCMGQPVIPELQLNNLVDMWLQTTSSSQRIPVTVGSSAKDFVMVLTYAHKVAPPPS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1642 432 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 3 112 IPR013083 -
Mibi02g1642 432 MobiDBLite consensus disorder prediction 249 273 - -
Mibi02g1642 432 ProSiteProfiles Zinc finger RING-type profile. 19 60 IPR001841 -
Mibi02g1642 432 SUPERFAMILY RING/U-box 13 80 - -
Mibi02g1642 432 ProSitePatterns Zinc finger RING-type signature. 35 44 IPR017907 -
Mibi02g1642 432 MobiDBLite consensus disorder prediction 90 206 - -
Mibi02g1642 432 Pfam Zinc finger, C3HC4 type (RING finger) 19 59 - -
Mibi02g1642 432 MobiDBLite consensus disorder prediction 168 197 - -
Mibi02g1642 432 MobiDBLite consensus disorder prediction 231 304 - -
Mibi02g1642 432 MobiDBLite consensus disorder prediction 90 108 - -
Mibi02g1642 432 MobiDBLite consensus disorder prediction 112 147 - -
Mibi02g1642 432 SMART ring_2 19 59 IPR001841 -
Mibi02g1642 432 Gene3D - 303 406 - -
Mibi02g1642 432 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 1 427 IPR044807 GO:0004842
Mibi02g1642 432 MobiDBLite consensus disorder prediction 149 167 - -
Mibi02g1642 432 MobiDBLite consensus disorder prediction 231 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1642 Mibi-ChrMibi02 16633080 16638218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1642 2 349 C3H Transcription Factor Family AT2G30580 49.425 4.60e-107 318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1642 02 16633080 16638218 Mibi06g2434 06 44581824 44587054 CCT
Mibi02g1642 02 16633080 16638218 Mibi02g1642 02 16633080 16638218 ECH