Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1641 ATGTCGCAATTTCTATTTGGTGGTTTCTGCTTCTCTGTTCTCTGGGGGATTAGGTTTTGTCGTCTTCTCTTTTGCCCTTTTAGGCAGATGGAAGCTAACATGGAAGAGGTTGAAGAAGCTAACAGAGCGGCTGTTGAAAGCTGTTACAAGGTTCTGAGCTTGTTGTCTTATCCCCAAGATCAAGTTCAGCATAGGAACTTAATGGTAGAAACTGGGGAGGCTGTGGGGAAGTTCAAGAAAGTTGTTTCTTTGCTTAGTAACGGTTTGGGTCATGCAAGAGTCAGGAAACCCAAAAGACTCCAAATTCCTATTCCCCAAAGTGTGCTCTTGGACAACCCTACTTGTAGATCAAATTATCAGTCAAAGAATTTGCAATTCCCCCAAAATAGCTCCAGGGATGAGTCTATTCAGGAATTGAGAAATTCACTCTCCCTGGGAAATCCATCTTTGGAATTGAGCTCCAGTGGGAAAAATCCTCTCCAACTTACCCAACAAACATCTTCACAGCATTATCACTTCCTTCAGCAGCAGCAACAAAGGTTATTGCTCCAGCATCATCAACAACAGTTGAAACAACAAGCAGATTTGGCGTATAGGAGGAACAATAATGGCATAAATCTGAATTTTGATAGCTCTAGTTGTACACCAACAATGTCATCAACTAGGTCTTTTATTTCTTCCTTGAGCATAGATGGAAGCGTGGCTAACATGGATGGAAGTGCTTTTCATTTAATCGGTGCTCCTCTCTCCTCAGATCAGAATTCACTTCACCATAAAAGAAAGTGTTCTGGCAGAGATGAGGGCAGCGTCAAGTGTGGGAGTAGCAGTACCAGATGCCACTGCTCAAAGAAGAGGAAACACAGAATAAAGAGATCAATTAAGGTTCCTGCCATCAGCAACAAGCTTGCTGATATACCCCCTGATGATTATTCATGGAGAAAGTATGGGCAGAAGCCAATTAAGGGCTCCCCTCACCCTAGGGGATACTATAAGTGCAGCAGCATGAGAGGTTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGACCCTTCCATGCTAATTGTTACCTATGAAGGCGATCACAACCACTCTAAAATACCAACACAATCTGCAAATGCATAA 1125 0.432 MSQFLFGGFCFSVLWGIRFCRLLFCPFRQMEANMEEVEEANRAAVESCYKVLSLLSYPQDQVQHRNLMVETGEAVGKFKKVVSLLSNGLGHARVRKPKRLQIPIPQSVLLDNPTCRSNYQSKNLQFPQNSSRDESIQELRNSLSLGNPSLELSSSGKNPLQLTQQTSSQHYHFLQQQQQRLLLQHHQQQLKQQADLAYRRNNNGINLNFDSSSCTPTMSSTRSFISSLSIDGSVANMDGSAFHLIGAPLSSDQNSLHHKRKCSGRDEGSVKCGSSSTRCHCSKKRKHRIKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGDHNHSKIPTQSANA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1641 374 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 35 371 IPR044810 GO:0003700
Mibi02g1641 374 Gene3D WRKY domain 290 368 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi02g1641 374 Pfam Plant zinc cluster domain 259 304 IPR018872 -
Mibi02g1641 374 SUPERFAMILY WRKY DNA-binding domain 304 365 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi02g1641 374 FunFam WRKY transcription factor 65 290 367 - -
Mibi02g1641 374 ProSiteProfiles WRKY domain profile. 301 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi02g1641 374 Pfam WRKY DNA -binding domain 308 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi02g1641 374 SMART WRKY_cls 306 366 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi02g1641 374 Coils Coil 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1641 Mibi-ChrMibi02 16615485 16617681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1641 34 371 WRKY Transcription Factor Family AT2G30590 56.104 1.05e-124 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi02g1641 WRKY 5.2e-26 CL0274