Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1629 ATGGAGTTCAGGTACGGAGAAGAGTCAAAGAGCTGGAGCGAAGAAGAAAGCGATGATCGGGCGGAGAATAATGAAGAAAGAGCAAGTGGAAGATCCTATGAGTGTGTGTTTTGCAAGAGAGGATTCACCACAGCACAAGCCCTAGGTGGACACATGAATATTCACAGGAAAGATAGAGCCAAATCCACCAAATCCAGTTATGCTGCTTCCTCTTCAGCCAAATTAATAGTTGAAGACCATGCTATTTCAAGTTTCCCACCTCCCAATTACTTTTCTCCTGAGGTAGTAGATCACAACAATAATTCTAACTACCTTCCCTCCCAATTTTCTCTTCCTTCGTCTGTACAATATAGTGATCATCAAAGAGATCGGGACGGGTTTGGAGGAGATTATAATTGGAGCACGGGTTTGAATTTGTCTAATCCACTATATCCGCCTCATAACAATAATAAAGGCAACTTAGGAAGTAGCAGTGAAGAAGATGGTCTGGATTTGGAGCTTCGATTGGGTTATCATTCCTAA 522 0.4215 MEFRYGEESKSWSEEESDDRAENNEERASGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKSTKSSYAASSSAKLIVEDHAISSFPPPNYFSPEVVDHNNNSNYLPSQFSLPSSVQYSDHQRDRDGFGGDYNWSTGLNLSNPLYPPHNNNKGNLGSSSEEDGLDLELRLGYHS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1629 173 Gene3D Classic Zinc Finger 7 84 - -
Mibi02g1629 173 MobiDBLite consensus disorder prediction 1 30 - -
Mibi02g1629 173 Pfam C2H2-type zinc finger 33 57 - -
Mibi02g1629 173 MobiDBLite consensus disorder prediction 138 162 - -
Mibi02g1629 173 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
Mibi02g1629 173 MobiDBLite consensus disorder prediction 138 157 - -
Mibi02g1629 173 PANTHER OS07G0101800 PROTEIN 7 172 - -
Mibi02g1629 173 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
Mibi02g1629 173 SUPERFAMILY beta-beta-alpha zinc fingers 30 59 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1629 Mibi-ChrMibi02 16478835 16479356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1629 33 64 C2H2 Transcription Factor Family AT5G43540 78.125 2.20e-13 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi02g1629 zf-C2H2_6 1.4e-05 CL0361