Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1625 ATGGCGAATCCTCCAAAGCCATGGAAGGCGGAGTATGCAAAGTCTGGACGATCTTCTTGCAAGACTTGCAAGAGTACCATTGCCAAAGAGGCTTTTCGCCTCGGCAAAATGGTTCAAGCCTCCCAGTTCGATGGTTTCATGCCGATGTGGCATCATGGTGGTTGTATATTGAAGAAACCAAAACAGATAAAATCAATTGATGATGTTGAGGGCATAGAGGTGCTCCGTTGGGAGGATCAACAGAAAATAAGAGAATATGTTGAGTGCGCTGCACAACCAAAGTCAATTAATATTAAAGATATGGTGTATGGTATTGAAGTTTCACAAGCTTCTCGTGCTACGTGCAAGCATTGTGCTAAAAAGATAATTAAAGGAGAGGTTCGTATATCTAGTAAGCCAGATGGTCAAGGTGCTAAAGGATTGGCTTGGCACCATGCAAGCTGTCTTATGGAATTGTCTCCATCAATACAAGTGGAAAAGTTGCCTGGATGGGATGGTCTCTCGCCTTCTGATCAATCTGCTGTCAATGCTGTAGTGAAGAAACTTCATTGTAAGCGGGAAGACATTGAGAGTCAAAAGGTTAAAGATGCCAGATGTGAATCAACTTCTAAAGCTGGGACAAAACGCAGGAATGACGCTGGTAATAACCCCAAGTCAAAAGTTGCCAAGGTTGAGGGTGATGCTTCTGAGGGCGTGGCTGCAAATGTAAATGACTCAAGGAAAGCATCTGATCTGGAGAGTAGACTGGAGGCCCAAACCAAAGAATTCTGGACTCTTAAAGATGATCTGAAGCATGTGACAACTGCTGAGTTACGTGTAATGCTGGAAACCAATAGTCAAGATTCAACAGGATCAGAGCTTGATTTGCGTGACCGCTGTGCCGATGGAATGATGTTTGGACCACTTGCTTGTTGCCCGATATGTTCTGGTTCTATCCGTTATTCTGGAGGAATGTACCGGTGCCATGGGTATGTTTCTGAATGGAGCAAATGTTCCTACTCTACTAACGAACCCAAACGAGTTAGACAGAAGTGGAAAGTTCCTGAGGGAACAGATAATCAGTACCTTAAAAAGTGGTTCAAATCACAAAAGGCTGAGAAACCGGTTAGGTTGGTGCCTCCACATTCATCATCAAATTCTGAAAGCCAACTCGTTGCTTGCCAGCATCAATCTGCAAACAGTGAAAATTTGGGAGAATTGAGAGTTGCTATCATTGGATATCCTAAAGAATCAATTGTGAAGTGGGAAAACAAAGTTGAGGAGGTTGGTGGTGTGCTTCATGCTAAAGTAAAGAAAGATACTAGCTGCTTGGTGGTGATAGGGGCACCGGATGAGCATGAAGCTGAAATACGGAAGGCAAAGAGGATGAAAGTACCTATAGTCAGAGAGAATTATCTGGTTGATTGTGTGGAAAGAAAGAAGAAGCTTCCGGTTGCCTCATACAAGGTTGAAGCTGCTAGTGAAGGCTCAAGCATGGTCACCATAAAAGTGAAGGGTCGAAGTGCTGTTCATGAGGCCTCCGGCCTTCAGGATTCTGGTCACATACTTGAGGAAGGAAAAAGCATATTTAATACAACTCTGAATTTGTCCGACTTGTCTACTGGTGTTAACAGCTACTACATTATCCAGATAATTCAAGAAGATAAGGGATCGGGATGCTATGTATTCCGTAAATGGGGACGAGTTGGTAATGACAAGATTGGGGGAAGTAAACTGGATCATATGTCAAAAGCAGATGCCATTGCCCAATTCAAACGGTTATTCTTTGAGAAGACTGGAAACCCTTGGGACGCATGGGAGCAAAAGAATTTTCAAAAGCAACCTGGAAGATTTTTCCCTCTAGATATTGATTATGGGGTTAACAAACAAGTTACAAAGAAAAATAACAAAAATGCAGACAGTAAACTGGCCCCTCCACTTCTAGAATTGATGAAGATACTTTTCAATGTGGAAACATACAGGGCTGTTATGATGGAATTTGAGATAAATATGTCAGAAATGCCACTAGGGAAGCTGAGCAAAAGTAACATTCACAAAGGGTTTGAAGCTTTAACGGATATACAGAATCTGTTGAGCAACAATAATCCCAATCCTTCAGTCAGAGAAAGCTTACTTATTGATGCTAGCAATCGATTTTTCACTGTAATCCCTTCTATTCATCCACACGTTATTAGGGATGAGGAAGATTTTAAGTCGAAGGTGAAAATGTTAGAATCACTTCAAGACATTGAAATAGCTTCAAGATTAGTTGGATTTGATGTAGATGACGATGACTCCATTGATGATAAGTATAAGAAGCTTCACTGTAACATTTCTCCGCTCCCTCATGATAGTGAAGATTATCGTCTGATTGAGAAGTTTCTTAATACTACTCATGCCCCTACACATACGGATTGGAGTCTTGAGCTAGAAGAAGTCTTTGCACTTGAGAGAGAAGGAGAATTTGACAAGTATGCCCCTTACAGAGAAAAGCTGGGTAACAGAATGCTTCTATGGCATGGGTCTAGGTTGACAAATTATGTCGGCATACTTAGCCAAGGACTGAGAATTGCACCTCCTGAAGCCCCAGCAACTGGCTATATGTTTGGCAAAGGGATATACTTTGCTGACATGGTCAGCAAAAGTGCTCAGTATTGCTTCACTGATAAGAAAAATCCTGTTGGTCTGATGCTTTTGAGTGAAGTTGCCCTTGGAAATGTCTACGAGCTTAAGAATGCTAAGTACTTGGACAAACCTCCGGAAGGAAAACACGCTACTAAAGGATTGGGCAAGAAAGTACCTGATGACTCAGGTTTCGTAAGGTGGAGAGATGACGTCATTGTCCCTTGTGGAAAACCAGTGTCATCAAGAGTCAAGACTTCTGAGCTCATGTATAACGAGTTTATTGTTTACAATACTGCTCAGGTTAAGATGCAGTTCTTGTTGAAGGTGAAGTTCCATCATAAGAGATGA 2952 0.419 MANPPKPWKAEYAKSGRSSCKTCKSTIAKEAFRLGKMVQASQFDGFMPMWHHGGCILKKPKQIKSIDDVEGIEVLRWEDQQKIREYVECAAQPKSINIKDMVYGIEVSQASRATCKHCAKKIIKGEVRISSKPDGQGAKGLAWHHASCLMELSPSIQVEKLPGWDGLSPSDQSAVNAVVKKLHCKREDIESQKVKDARCESTSKAGTKRRNDAGNNPKSKVAKVEGDASEGVAANVNDSRKASDLESRLEAQTKEFWTLKDDLKHVTTAELRVMLETNSQDSTGSELDLRDRCADGMMFGPLACCPICSGSIRYSGGMYRCHGYVSEWSKCSYSTNEPKRVRQKWKVPEGTDNQYLKKWFKSQKAEKPVRLVPPHSSSNSESQLVACQHQSANSENLGELRVAIIGYPKESIVKWENKVEEVGGVLHAKVKKDTSCLVVIGAPDEHEAEIRKAKRMKVPIVRENYLVDCVERKKKLPVASYKVEAASEGSSMVTIKVKGRSAVHEASGLQDSGHILEEGKSIFNTTLNLSDLSTGVNSYYIIQIIQEDKGSGCYVFRKWGRVGNDKIGGSKLDHMSKADAIAQFKRLFFEKTGNPWDAWEQKNFQKQPGRFFPLDIDYGVNKQVTKKNNKNADSKLAPPLLELMKILFNVETYRAVMMEFEINMSEMPLGKLSKSNIHKGFEALTDIQNLLSNNNPNPSVRESLLIDASNRFFTVIPSIHPHVIRDEEDFKSKVKMLESLQDIEIASRLVGFDVDDDDSIDDKYKKLHCNISPLPHDSEDYRLIEKFLNTTHAPTHTDWSLELEEVFALEREGEFDKYAPYREKLGNRMLLWHGSRLTNYVGILSQGLRIAPPEAPATGYMFGKGIYFADMVSKSAQYCFTDKKNPVGLMLLSEVALGNVYELKNAKYLDKPPEGKHATKGLGKKVPDDSGFVRWRDDVIVPCGKPVSSRVKTSELMYNEFIVYNTAQVKMQFLLKVKFHHKR 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1625 983 SUPERFAMILY ADP-ribosylation 767 982 - -
Mibi02g1625 983 Pfam BRCA1 C Terminus (BRCT) domain 407 470 IPR001357 -
Mibi02g1625 983 FunFam Poly [ADP-ribose] polymerase 768 983 - -
Mibi02g1625 983 Gene3D - 768 983 - -
Mibi02g1625 983 SMART WGR_cls 523 606 IPR008893 -
Mibi02g1625 983 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 634 768 IPR036616 GO:0003950
Mibi02g1625 983 FunFam Poly [ADP-ribose] polymerase 301 362 - -
Mibi02g1625 983 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 8 91 IPR001510 GO:0003677|GO:0008270
Mibi02g1625 983 Pfam WGR domain 524 601 IPR008893 -
Mibi02g1625 983 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 106 178 IPR001510 GO:0003677|GO:0008270
Mibi02g1625 983 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 11 87 IPR001510 GO:0003677|GO:0008270
Mibi02g1625 983 PIRSF NAD_ADPRT 1 983 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Mibi02g1625 983 Gene3D - 233 300 - -
Mibi02g1625 983 Gene3D - 301 361 IPR038650 -
Mibi02g1625 983 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 102 190 - -
Mibi02g1625 983 MobiDBLite consensus disorder prediction 193 216 - -
Mibi02g1625 983 FunFam Poly [ADP-ribose] polymerase 2 100 - -
Mibi02g1625 983 Gene3D - 623 767 IPR036616 GO:0003950
Mibi02g1625 983 CDD parp_like 634 978 - -
Mibi02g1625 983 Gene3D BRCT domain 388 491 IPR036420 -
Mibi02g1625 983 SUPERFAMILY BRCT domain 395 483 IPR036420 -
Mibi02g1625 983 ProSitePatterns Poly(ADP-ribose) polymerase zinc finger domain signature. 20 55 IPR001510 GO:0003677|GO:0008270
Mibi02g1625 983 Pfam PADR1 (NUC008) domain 291 340 IPR012982 -
Mibi02g1625 983 CDD WGR_PARP1_like 513 618 - -
Mibi02g1625 983 FunFam Poly [ADP-ribose] polymerase 390 492 - -
Mibi02g1625 983 MobiDBLite consensus disorder prediction 193 244 - -
Mibi02g1625 983 Pfam Poly(ADP-ribose) polymerase, regulatory domain 634 764 IPR004102 GO:0003950
Mibi02g1625 983 ProSiteProfiles BRCT domain profile. 392 483 IPR001357 -
Mibi02g1625 983 ProSiteProfiles PARP alpha-helical domain profile. 633 751 IPR004102 GO:0003950
Mibi02g1625 983 Pfam Poly(ADP-ribose) polymerase catalytic domain 778 979 IPR012317 GO:0003950
Mibi02g1625 983 SMART PADR1_2 289 342 IPR012982 -
Mibi02g1625 983 Gene3D - 97 203 IPR036957 GO:0003677|GO:0008270
Mibi02g1625 983 Gene3D - 2 96 IPR036957 GO:0003677|GO:0008270
Mibi02g1625 983 SMART zf_PARP_3 11 88 IPR001510 GO:0003677|GO:0008270
Mibi02g1625 983 SMART zf_PARP_3 106 180 IPR001510 GO:0003677|GO:0008270
Mibi02g1625 983 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 103 183 IPR001510 GO:0003677|GO:0008270
Mibi02g1625 983 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 89 - -
Mibi02g1625 983 SUPERFAMILY WGR domain-like 491 616 IPR036930 -
Mibi02g1625 983 SMART BRCT_7 395 473 IPR001357 -
Mibi02g1625 983 ProSiteProfiles WGR domain profile. 512 611 IPR008893 -
Mibi02g1625 983 ProSiteProfiles PARP catalytic domain profile. 758 983 IPR012317 GO:0003950
Mibi02g1625 983 PANTHER DNA LIGASE 104 981 - -
Mibi02g1625 983 FunFam Poly [ADP-ribose] polymerase 626 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1625 Mibi-ChrMibi02 16447578 16456407 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1625 02 16447578 16456407 Mibi06g2415 06 44398045 44398809 CCT
Mibi02g1625 02 16447578 16456407 Mibi02g1625 02 16447578 16456407 ECH