Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi02g1624 ATGGCTTGTTCTGGAAGTAATAGTAGTGGAGGGTCAGGGTCTCCTTGCGGGGCATGCAAGTTTTTGAGAAGGAAATGTGCATCTGATTGTATATTTGCCCCTTATTTCTGCTCAGAACAAGGTCCTTCTAGTTTTGCTGCCATACACAAAGTGTTTGGAGCTAGTAATGTTTCCAAACTGCTCTTGAACTTGCCTGCTCATGATCGTTGTGAGGCTGTCCTCACTATTGCCTATGAAGCTCAGGCTCGTATCAGAGACCCTGTTTATGGCTGTGTCTCCCACATTTTTGCCCTGCAACAACAGGTGGCATGTTTGCAAGCACAGCTGATGCAAGCCAAGGCACAGTTGGCTCAGAAGAACATAGAGAATAATAATGAAGAACACTGCTGGGGAGGAAGGAATAATGCTTATGGGCAAACAACAATGAATAATCCAATATATGGCACAAGTAACAATTACACCAACATGAATCCTATTTCTCCTCAGAGTTCTCTTGACTCCATTGATTATTACTCGTCCATCCACGATTATGGATCATCCACTAGTTTGCAGCAAGAGGGTTTCTCTTCCCACCACCAATCTCGCTCCAAGAAAAGCCCTTCTTATGATAGCCATGACTTGAGCGAGCTTCAAGAACTAGCTCTCAGAATGATGAGAAACTAG 663 0.4404 MACSGSNSSGGSGSPCGACKFLRRKCASDCIFAPYFCSEQGPSSFAAIHKVFGASNVSKLLLNLPAHDRCEAVLTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQAKAQLAQKNIENNNEEHCWGGRNNAYGQTTMNNPIYGTSNNYTNMNPISPQSSLDSIDYYSSIHDYGSSTSLQQEGFSSHHQSRSKKSPSYDSHDLSELQELALRMMRN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi02g1624 220 Coils Coil 95 127 - -
Mibi02g1624 220 Pfam Lateral organ boundaries (LOB) domain 15 113 IPR004883 -
Mibi02g1624 220 MobiDBLite consensus disorder prediction 191 206 - -
Mibi02g1624 220 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Mibi02g1624 220 PANTHER LOB DOMAIN CONTAINING PROTEIN 11 211 - -
Mibi02g1624 220 MobiDBLite consensus disorder prediction 182 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi02g1624 Mibi-ChrMibi02 16442992 16444543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi02g1624 1 220 AS2 family AT2G42430 52.326 3.36e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi02g1624 LOB 1.4e-36 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g1624 02 16442992 16444543 Mibi02g1624 02 16442992 16444543 ECH